Xiphophorus couchianus (Monterrey platyfish): 114161547
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Entry
114161547 CDS
T05908
Name
(RefSeq) splicing factor, arginine/serine-rich 15-like
KO
K13167
SR-related and CTD-associated factor 4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114161547
03041 Spliceosome [BR:
xco03041
]
114161547
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114161547
Spliceosome [BR:
xco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
114161547
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
114161547
NCBI-ProteinID:
XP_027900669
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All DBs
Position
18:complement(7399831..7425042)
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AA seq
792 aa
AA seq
DB search
MDAVNAFNTELFAMLEMKPPISRAKMMSVTKSAIKAIKLYKHVVQIVEKFIKKCKPELKV
PGLYVVDSIVRQSRHQFGVEKDVFGPRFLKNFTDTFRNLYCCPEDDKNKIIRVLNLWQKN
GVFDMEILQPLMNMANGTVVPHSAAEVPVDLQPETTPPTGNASDVLSVLPTPEALAAVAQ
LFQSSHAQELQRMLQNFQQAEKTVGTSTIANNVTNQHQMPVTQPNPRTDTVKKGSLAEKL
LDRFDYDDEPEDMAVSEGNIQTQGIPENMSNQFPVQMLNTDAHPNMLGWTRDTKHSEGMS
HVEQNLTPDGFTSVKESESWENSRENSSTKQEGRDRDYGARSRSSSRSPRRRRSRSSSRS
RWSRHRRSRSRERRWRSRASSEDQSDREKDRERRQKGLPSLKSQTLSVCSTTLWVGQLDK
KTQQSDVMSLLEEFGQIESINMIPPRGCAYIVMVHRQDAYMALKKLSKGSYKSNQKPTKI
AWALNKGIKSAHKKLWDVEQGVTYIPWSKVKVEELESYQEGGMLDPETLNPEWNTAEDVK
SQAAVNGAMEIVPDVAVSAHVQMPTVPQCEPIGSPPAFSAPIMLSPTSLPPRGAPFLHTE
FDAAHQVGGNFEAPVESIAGPSGGKDPSSAIGADNQMGSPTGQVMMLPNPAVMHGPPRPG
MQGPPRPGMQGPPRLGIQGPPRPGMQGPPRPGMQGPPRLGMPPLQPPLGIPNPHMPPFPG
PPNMHRMPSQMMPGGPMFPSDRFRMPMPFHPRGPPFQQHPSMGPEIMNDGERGHFRAVRP
GFGRPPFQRGRW
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgtgaacgcgttcaacacggagttgtttgctatgcttgagatgaagcctcca
atatcccgggctaaaatgatgtctgttaccaaatcagctattaaagccattaagctgtac
aaacatgttgtccagattgttgaaaagttcatcaagaagtgcaagccagaattgaaggta
cctggtctatatgtggttgattccattgtccggcagtcacgccatcaatttggtgttgaa
aaggatgtttttggaccccggtttttaaagaacttcacagatactttccgaaacctttac
tgctgtccggaggatgacaagaataaaattatcagagtgctaaatctctggcagaagaat
ggtgtgtttgatatggagatccttcagcctctaatgaatatggccaatggcactgttgtg
ccacattctgctgcagaagttcctgttgacctccaaccagagactacacctccgaccggt
aatgcttcagacgtactgtctgtcctacccactccagaagctttagctgctgtggcacaa
ctctttcagtcctctcacgctcaggagctccagaggatgctccagaactttcagcaggct
gaaaagacagttggaacgtctacaattgcaaataacgtaacaaaccaacatcagatgcca
gtaacccagcccaacccaaggactgatactgtgaagaaaggttctttagctgagaaactt
cttgaccgatttgactatgatgatgaacctgaggatatggcagtgtcagaaggcaacatt
cagacacaaggtatacctgaaaacatgtcaaaccagttccccgttcagatgctaaacaca
gatgctcaccctaatatgttgggttggactagagacacaaagcatagtgaaggaatgagt
catgttgagcaaaatctgacacccgatggatttacttctgtgaaagagtctgaatcatgg
gaaaactcaagagaaaattcttcgacgaagcaggaggggagagacagagactatggtgcg
agatccagatcttcttctagatcgccaaggagaagaagatcgagatcttcatctcgctca
aggtggtcaaggcacagacgctctcgctccagagaacgccgctggagatctcgcgctagt
tcagaggaccagagtgacagagagaaggacagagaacgcagacagaaaggtcttcccagc
ttaaagagccaaactctcagcgtttgcagtaccacactttgggttgggcagctggacaag
aaaacccagcaatctgatgtaatgtcccttttagaagaatttggtcagattgagtccatc
aatatgattcctccgagaggttgtgcctatattgttatggttcacagacaagatgcttat
atggccttaaaaaaactcagtaaagggtcgtacaaatccaaccagaaacctactaagatt
gcttgggctttaaacaaaggtataaagtcggcacacaaaaagttatgggatgtggagcaa
ggggttacttacattccttggagcaaagtcaaagttgaagagttggagagctatcaggag
ggcggcatgctggatccagagaccctaaatccagagtggaatactgccgaagacgttaag
agccaggcagctgtaaatggagcaatggaaatagtaccagatgtggctgtcagtgctcat
gttcagatgccaacagttccgcagtgtgaaccgattggaagtccgcctgctttttcggcc
cccatcatgctttctccaacgtcattacctcctagaggagctcctttcttacacacagag
tttgacgccgcacatcaagtaggaggaaattttgaagctccagtggagtccattgcaggt
cctagtggaggcaaagatccctcctcagctattggtgctgacaaccagatgggttctcca
acaggacaggttatgatgctgccaaaccctgcagtcatgcacggtccccccagaccagga
atgcagggtccccccagaccgggaatgcagggtccccccagactgggaatacagggtccc
cccagaccgggaatgcagggtcctcccagaccgggaatgcaaggtcctcccagattggga
atgccacctctgcagcctccccttggcataccaaaccctcatatgcctccctttcctggt
ccaccaaacatgcaccgcatgccctcgcaaatgatgccaggagggccgatgtttccgtca
gatagattcagaatgcccatgcccttccatcctcggggccctcctttccaacaacatcca
tcaatgggaccggagattatgaacgatggggaaagggggcatttccgagcagttagacca
ggatttggacgcccaccatttcaaagagggaggtggtag
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