Xiphophorus couchianus (Monterrey platyfish): 114161568
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Entry
114161568 CDS
T05908
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04142
Lysosome
xco04144
Endocytosis
xco05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114161568
04142 Lysosome
114161568
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
114161568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114161568
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114161568
Membrane trafficking [BR:
xco04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
114161568
Exosome [BR:
xco04147
]
Exosomal proteins
Proteins found in most exosomes
114161568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
114161568
NCBI-ProteinID:
XP_027900711
LinkDB
All DBs
Position
18:14345457..14367850
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPSG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPF
YDSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKNPELWASV
LLETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGMVKEAIDSYIKADDPSAYME
VGQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDDKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMM
NHPADAWKEGQFKDIVTKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFF
SKMKQLPLVKTYLRSVQNHNNKAVNEALNNLFINEEDYAALRTSIDAYDNFDNISLAQSL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLAWFLN
EDKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDK
LEASESLRKQEEQATESQPIVYGTPQLMLTAGPNMAVPPQQAYGYGYTGAPAYGQPPQPS
FGYGM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctgcctatccgcttccaggagcacctgcagctccagaacttggggatc
aacccagccaacattggcttcagcactctcaccatggagtctgacaagttcatctgcgtg
agggagaaagtgggtgagcaggcccaggttgtcatcattgacatggccgatcctaacaac
cccatccgccggcccatctctgctgacagcgccatcatgaatcctgccagcaaagttatc
gcacttaaagacgctgcaaagaccctgcagatctttaacattgagatgaaaagcaagatg
aaggctcacaccatgacagacgatgtgactttctggaagtggatctctctcaacaccgtt
gccctggtcacagacaacgccgtgtaccactggagcatggaaggcgattctcaaccaatc
aaagtgtttgaccgtcactcgagcctggcaggctgccagatcatcaactaccgtactgat
gccaaacagaagtggttgctcctcattggtatctcagctcagcaaaaccgtgttgttggt
gccatgcagttgtactctgtggacaggaaagtctcccagcctattgaaggccatgctgct
ggctttgcacaatttaagatggagggcaacaccgaagaatcaactctgttctgctttgct
gtgcggggacaagcaggaggaaaacttcatattattgaagttggaaccccgccaagtgga
aaccaaccattccccaaaaaagccgtggatgttttctttcctccggaagcccagaatgac
ttccctgttgctatgcagatcagctccaagcaagatgtcgtttttctcatcacaaagtat
ggctacatccacctgtatgatctggagaccggaacttgcatctacatgaaccggatcagc
ggggagaccattttcgtcactgccccacatgaacccactgctgggatcattggagttaac
aggaaaggacaggtgctttcggtgtgtgtggaggaggaaaatataattccctacatcacc
aacgtgctccagaacccagacctggctctacgcatggctgtacgcaacaaccttgctggt
gctgaggaactatttgctcgcaagtttaacaccctgtttgctgcaggaaattactcagaa
gcagccaaggtggcagccaatgctcctaagggcatcctgcggactccagataccattcgg
aggttccaaagtgttccagcacaaccgggccagacttctcctttgctccagtactttggc
atcctgctggaccaaggccagctcaataagtttgagtctctggagctctgcaggcctgtt
cttcagcagggccgcaagcagctactggagaaatggctgaaggaggataagctggaatgt
tctgaggagctcggagacctggtgaagtctgttgatcccactctggccctcagtgtgtat
ctcagagcaaacgtccccaataaagtcattcagtgctttgcagagactggacagtttcag
aagattgttctttatgccaagaaggtgggctacacaccagactggatcttcttgttgagg
aacgttatgcggatcagtccagagcaaggtctccagttctcccagatgctggtgcaggac
gaggaacctcttgctgatattacacagattgttgacgtatttatggagtacaacctgatc
cagcagtgcacctcatttttactagatgctctaaaaaacaacagacccatggaaggaccg
ctgcagacacgtttactggaaatgaacttggttcatgctccacaggtggcagacgccatc
cttggcaatcagatgttcacccactatgaccgcgcccatgtggcacagctgtgtgagaag
gctggcctcctgcagagggcactggagcattacacagacctgtatgacataaagcgagcc
gtggtgcacacacaccttctcaacccagagtggttggtgaatttcttcggctccctctct
gtggaggactccttggagtgtctgagagccatgctgtcagccaacatccgccagaacctg
cagatctgtgtgcaggtggcttcaaagtaccatgaacagctcagtactcagtccctcact
gagctgtttgagtcattcaagagctttgaaggattattctacttcctgggttctatagtg
aactttagtcaagatccagaggtccacttcaaatatattcaagctgcctgcaaaactggc
cagattaaagaggtggagagaatctgtcgagagagtaactgctacgacccagaacgggtg
aagaacttcctgaaggaggccaaacttactgaccagcttcctttaatcattgtatgtgac
cgctttgattttgtccatgacctggtcctctacctgtatcgcaacagccttcagaaatac
atcgagatctacgttcagaaggtgaacccaagtcgtctgccggtggtcatcggaggttta
ttggacgtggactgtgctgaggatgtgattaagaacctgatcatggtggttagggggcag
ttttccacagatgaacttgttgctgaagtagagaaaagaaatcgtctgaagttgctgctg
ccctggttggaggctcgtatccatgaaggctgcgaggaacctgctacccacaatgctttg
gccaagatctacatcgacagcaacaacaaccctgagcgctttctaagggagaaccctttt
tacgacagccgtgttgtgggcaaatactgcgagaaaagagacccccacctggcctgcgtg
gcttacgagagaggacagtgtgaccaagaactcattcatgtgtgcaatgaaaactcgctg
ttcaagagtctgtcccgctaccttgtacgacgcaagaaccctgagctgtgggcgagtgtc
ctcctggagaccaacaactacagaagaccccttattgaccaggtggtccagacagcatta
tcagagactcaggatccagaggaagtatccgtcacagtgaaggctttcatgacggccgac
ctgcccaatgaactcattgagctgctggaaaagattgtgctggacaattctgtcttcagt
gagcacagaaacctgcagaacctgctcattctgacggccattaaagctgacagaactcgt
gttatggagtacattaatcgccttgacaactacgatgccccagacatagcaaatattgcc
atcagtaacgagctgtttgaggaggcctttgcaattttcaggaagtttgacgttaacacc
tctgctgttcaggttctgattgagcacattggaaacttagacagggcatatgaatttgcc
gagcgttgcaatgagcctccagtgtggagtcagctggccaaggcccagctgcagaaggga
atggtcaaggaagccattgactcctacatcaaggctgacgacccgtctgcttacatggag
gtgggacaggctgcagcccaaagtggaaactgggaggatctggtaaagttcttgcagatg
gctcgtaagaaggctcgggagtcgtatgttgagacggagctgatcttcgctttggccaaa
accaatcgtctggcagagctggaagagttcatcaacggtcccaacaacgctcacattcag
caagtgggcgatcgttgttatgacgacaagatgtacgaagcggccaagctgctttacaac
aacgtctccaactttggccgtctggcctccacgttggtgcatttgggagaataccaggca
gccgtagatggagcgcgcaaagccaacagcacccgcacctggaaggaggtgtgttttgcc
tgtgtagatgggaaggagttccgtcttgcccagatgtgcggtctgcacatcgtcgtccat
gcagacgagctggaggaactaatcaactactaccaggaccgcggttattttgaggagctg
atcaccatgcttgaagccgctctgggtctggaacgcgcccacatgggaatgttcactgag
ctggccatcctctattccaagtttaagccacagaaaatgagggaacacctggagctcttc
tggtcccgcgtcaacattcctaaagttctcagggcagctgagcaggcccacctctgggct
gagctggtgttcctctatgacaagtatgaggaatatgacaacgccatcatcaccatgatg
aaccatccagctgacgcctggaaggagggtcaattcaaagatattgtcaccaaggtggcg
aatgtagagctgtactacaaggccatccagttttatctggagttcaagccgttgttactg
aacgacctgctcatcgtgctctctccccggttggaccacacccgggccgtgaacttcttc
agcaagatgaagcagctgcctctcgttaaaacgtacctgcggtcggtccagaatcacaac
aacaaggcagtaaatgaggcactcaacaacctcttcattaatgaggaagactacgcggct
ttgcgaacatccatcgacgcgtatgataacttcgacaacatctcactggctcagagcctg
gagaagcacgaactgatcgaattcaggaggattgctgcttatcttttcaagggcaacaac
cgctggaagcagagcgttgagctctgcaagaaggacaagctctacaaggacgccatgcag
tatgcatcagagtccaaagacacggagctggccgaggagcttctggcctggttcctgaac
gaagacaaaaaggagtgtttcgccgcatgcctgttcacctgctatgacctgctgcggcca
gacgtggtgctggaaaccgcctggcgacacaacatcatggacttctccatgccatacttc
atccaggtcatgagggagtatctatctaaggttgatgcgataaaggaaaaggtggacaaa
ctcgaagcctctgagtctctgaggaaacaggaggagcaggccacggaatctcaacccatt
gtttacggcacaccgcagctgatgctaacagcagggcccaacatggccgtgcctcctcag
caggcgtatggctacggctacacgggggcaccagcctacggccagccgccacagcccagc
tttggttacggcatgtga
DBGET
integrated database retrieval system
