KEGG   Xiphophorus couchianus (Monterrey platyfish): 114161643
Entry
114161643         CDS       T05908                                 
Symbol
pnkp
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase isoform X1
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    114161643 (pnkp)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xco01009]
    114161643 (pnkp)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xco03400]
    114161643 (pnkp)
Enzymes [BR:xco01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     114161643 (pnkp)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     114161643 (pnkp)
Protein phosphatases and associated proteins [BR:xco01009]
 HAD phosphatases
  Other HAD phosphatases
   114161643 (pnkp)
DNA repair and recombination proteins [BR:xco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     114161643 (pnkp)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 Hydrolase_6
Other DBs
NCBI-GeneID: 114161643
NCBI-ProteinID: XP_027900878
LinkDB
Position
18:11196293..11202933
AA seq 590 aa
MSWALAGPSGIRIPLEDGRAVILGRGPDTGVADKNCSRHQVKVVACYAEQDVVVTQLGPN
PSFLNREKLGRGQSGKLTHGGTLYLVNQSHPFTLDVFLSSACSMTQRNLKISDKTKGGRN
RTEAESSPSPKRSIKDFFSVSPSKASKRQLNTERAQPEVKRQKLDEQDEEERLSEEKLKE
LQEFAEKNMTEEKKDTQSSPSSSPAKACVKSSWQQTGTLMFYTAAGVKASKKIAGFDIDG
CIITTKSGKVFPTAPDDWKILYPEIQPRLASLLKKGYKVVFFTNQLGIARGKLIPEVFKS
KVEDILTTLQLPVQVFVASGPGVYRKPVMGMWNHLCEKANDGVAVDKTQSFYVGDAAGRP
ENWAPGKKKKDFSCSDRLFALNIGLQFYTPEEYFLGWKSAPYSLPDFDPRKLDSSCRLFD
PPSASLICTKTEVIVAVGYPAAGKSSFFHTHIVPKGYVYVNRDTLGSWQNCVSACERALK
EGRSVAVDNTNPDRESRKRYLDVAKAAGVSCRCFFFTATLEQAKHNNRFREMAPSNSKHA
KVNDMVFHSYKKNFVAPNLSEGFSEILQIHFVPHFQDRQSETLFRQFSEG
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgtcgtgggcgctggctggaccttctgggatccggattccactggaggacggacgggct
gtgattctgggccggggtccggacactggggtggccgacaagaactgctccaggcaccag
gtgaaggtggtggcttgttatgcagagcaggatgtggttgttactcagcttgggccaaat
cctagtttcctaaatcgtgagaagctgggtcggggtcagtcaggtaaacttacccacgga
ggcaccctgtacctggtcaaccagagccacccatttacactggacgtctttctgagctca
gcttgcagcatgacacagaggaacctgaaaatctcagataagactaaaggaggtagaaac
aggacggaggctgaatccagtccgtctccaaaacgcagtattaaggacttcttttccgtc
tctccctctaaggcttctaaaaggcagctgaacacagagagggcccagcctgaggtgaag
cgacagaaattagatgagcaggatgaggaggagagactctctgaggaaaagctaaaggag
ctgcaggagtttgcagaaaagaacatgacagaggagaaaaaagacacccaatcttccccg
tcttcatctccagcaaaggcgtgcgtgaagagcagctggcagcagacaggaaccctcatg
ttttacacagctgcaggagtgaaagcgagcaaaaagattgctgggtttgatattgatgga
tgtattatcaccaccaaatctggaaaagtctttcccaccgcacctgatgactggaagatt
ctgtaccctgagattcagcccaggctggccagcttgctcaaaaaaggctataaggttgtt
ttcttcaccaaccagctggggatcgctaggggcaaactgataccagaggtgttcaagtct
aaagtggaggatatcctcaccacgctgcagctgcctgtgcaggtgtttgtcgccagcggc
cctggtgtctacaggaaacccgtgatgggaatgtggaatcacctgtgtgagaaagctaat
gatggggtggctgtcgacaagacccagagtttttatgtaggagatgctgcaggaaggccg
gagaactgggctccaggcaagaagaagaaggatttctcctgcagtgacagattgtttgcg
ctgaacattgggcttcagttctacacaccagaagaatactttttaggatggaagagcgcc
ccctacagcctgcctgactttgaccctcggaagctcgactctagctgcagattattcgac
ccgccgtccgcctcactcatctgcaccaagacagaagttattgttgccgtgggttaccct
gcagctggtaaatcctccttcttccacacccacattgttccaaagggctacgtctacgtc
aacagggacacgctcggctcttggcagaactgcgtgtcggcatgtgagcgagctctgaag
gagggccgcagcgtcgccgtggacaacaccaacccagaccgagagtctcgcaaacgatac
ttggacgtggccaaggcagcaggagtgtcctgtcgctgtttcttcttcactgccaccttg
gagcaagccaagcacaataacagattccgtgagatggctccatctaacagcaaacacgct
aaggtcaacgacatggttttccacagctacaagaaaaattttgtggctccaaatctctcc
gagggtttctctgagatccttcaaatccactttgttccacacttccaggacagacagtct
gaaactttgttcaggcagttctctgaggggtga

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