Xiphophorus couchianus (Monterrey platyfish): 114161657
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Entry
114161657 CDS
T05908
Symbol
arap1
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114161657 (arap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114161657 (arap1)
Membrane trafficking [BR:
xco04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
114161657 (arap1)
Endosome - Golgi transport
Arf GTPase associated proteins
114161657 (arap1)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
114161657 (arap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
SAM_1
SAM_2
PH_11
RA
PH_6
PH_3
PH_8
SOS1_NGEF_PH
PH_13
Motif
Other DBs
NCBI-GeneID:
114161657
NCBI-ProteinID:
XP_027900913
LinkDB
All DBs
Position
18:complement(17241116..17312289)
Genome browser
AA seq
1607 aa
AA seq
DB search
MSLTESSANVSDWLSTLRLEQYGEAFQEAGLTTLQDCQNLTPNQLDRMGINLPGHQKRIL
ANINKMTASYDAYSNVIKPEASEQTGHPEVKRKEKPVPVPMQRKVEEGKMDGEIIRPTPR
ERDKPVPKERHLSNIQDNSNREGETKPVPLQRHSAPVGGKEEERSGATDEKRAKPVPKER
TKFRSNSCQPTPIVSPLPDTSLPPVPPRSTPNCPPQPFISSLSSSSLAQHSISLSLDRIV
VVPPEVKCKSSSLISTPTSTLVSTEAPVQTLSIQSTTPRPNSLPIQPSTPSFGGDEARKS
SPISLASAPSEDKNVPPLPPKAGAKGPPPIPQRVPLQSPKTHSPPLTKKGTEELIQTDPT
PQVPLRNRTPQAQEISKPSDQTELQPALPARKISKPPLLVPVNDSSNDYVDTDLLNSSVQ
QRKVADRDMSLQVPIHQQKRVCSLYSDDELLDEDDPDSPPWQTERIVNLPGSFCLPNSGR
LSTPIKEDSSQLSSVIKMGWLDKNPPQGTLYYQKRWVKLEFDYLRYFDNEKEVYSKGFIS
TAFITNVSSVGELKFEVATNNRTFIFRAENEDERNEWVTELRNCTGGPKRPITLIAGSPL
TPDYFGYLELRGLRSKLFTVVASDKVLLYKSADDYRIGVGITFIDMNVGNVKDSDRRSFD
LTTPYRIFSFIAESEQSREQWVQAMRNAIGEALSNNEVVEQIWREPSNSFCADCGAPQPD
WAAINLCVVICKQCAGEHRGLGPSISKVRSLKMDKKIWTEELIQVFLKLGNELVNSFWAA
NVPPSEALSPSSCSEDRRRFISNKYRQGKYRKYHALYGNQRELNNALCINVQCSDLLETL
SLIFCGADVNCSTGMANCPSPESLANAHSQPLQAELIKHNLNTELPQLQVEADMDLKHYP
PPPCVSYEGYLFKTASMGRAVAERKVKEEFSRRWCMLNDGIFSYYEHDKSTNPNGTLKAS
EIVCLAVDSPEKHGYDFTFEVYSESERIYLFGTDEPDSHKEWVKCIAKTFIPATAEPLLR
LSFERIGRLKCKDGLNLQKSKVGWFALTGSTLHVYLENSKGEEIHLRKLNELSIQQDNEV
LVLVEKGRTLYIEGERKLDFAGWCGAIQAAAGSGGDTLSQQQLTDTDIPVIVLSCIDYIT
QCGMTSEGIYRKSGVNSRVAALCDRFRRDARSLRLKEGEHQVDDVSNTLKRFFRELEEGL
FTSEYAYSWLAITALQDENTKISEYKALLDRLPRVNKATLQALINHLYCVQRFSDLNQMN
LHNLAIVFGPTLFQTDGKDYTAGRAVEDLIEHYTVIFEVDEQQLKRQLEEIKAIIRMRDN
LNTKFPSRPRFEGDGHFICTVYLEERKDTAEQHVKIPGSMTAAELAYEVLDRRNIPVKDK
DYWSCWEVCEEIERPLHYQERVLPILHSAGNESHLLIKKQPAMDAMITYLATKVDVSKHG
MMKYREERSILGLGLSSGNFHDRFFILNVTSLRMYKDVRSNRIEREWIIKNLKIYLGIKK
KLRPPTCWGLTVVYESKKQEKPERQQWYLCCETQSEMREWYATFLSIQNDGNLWPQDGVQ
QNPVSRVLPDTRHGNVSLIPLRGSENEMRNSVAAFSQDALALLRDVR
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgaccgaatccagtgctaacgtgagtgactggctgagcacgctacgtttggag
caatatggtgaggcattccaggaggccgggctgacaactttacaagactgccagaacctc
acgccaaatcaactggaccggatgggcatcaacctgccaggtcaccagaaacgaatcctg
gcaaacattaacaaaatgactgctagttatgatgcatactctaatgttataaagccagag
gcatctgagcagaccggtcatcctgaagttaaaaggaaagagaagcctgtgcctgttccc
atgcaaagaaaagtagaagaagggaaaatggatggcgagataataagacctacacccagg
gagagagacaaaccagtccccaaggagagacatttgtctaatatacaagacaacagtaat
agagaaggagaaacgaagcctgttcctctgcaaagacactctgctcctgtaggaggaaag
gaggaagagaggagtggagcaacggatgaaaaaagggctaagcctgtacccaaggagagg
acaaagtttcgttctaattcttgtcagcctacacccattgtgtctccactgcctgataca
tctttaccacctgttcccccacgcagcacacctaactgccccccacagcccttcatctca
tccctgagttcctcatctcttgctcaacactctatctctttgagtttggacaggatcgtt
gtggtacctccagaagtaaagtgcaaatcttcatccctgatatctacccccaccagcacc
cttgtttccacagaagcacccgtccaaactctcagcattcagtcaaccactcctaggcct
aattcattacccatacagccgtctaccccatctttcggtggggatgaagccaggaaatct
tctcccatctccttagcctccgctcccagtgaggacaaaaatgttccacctcttcctcca
aaagcaggcgctaaaggcccaccaccaatcccacagcgggttcctctgcagtctcccaaa
actcacagcccacctctgaccaagaaaggaactgaggagctgattcagaccgaccccact
ccgcaggttccactacgcaacaggacaccacaagcacaggaaatcagcaaaccgtccgac
cagactgaactacagcctgctctgcctgcaaggaagatctccaaacctcctctcttggtt
ccagtcaatgatagttctaatgactacgtggatacagacctgcttaactccagtgttcag
caaaggaaggtggcagacagggacatgtccctacaagtgcccattcaccaacagaagcgg
gtctgttctttgtatagcgatgacgagctgttagatgaagatgacccagattctcctcct
tggcagactgaacgcatcgtcaacctgcctggcagcttttgcctgcctaactccggcaga
ctctccacacctattaaggaagacagttcccaactttcttctgtcatcaagatgggctgg
ctggacaagaatccaccacaggggactctttattaccagaaacgatgggtgaagttagaa
tttgactacctaagatactttgacaatgagaaggaggtgtattccaaggggtttatctca
acagcctttatcactaatgtgtctagcgtgggggagttgaagtttgaggttgccacaaac
aatcggacatttatcttcagagctgaaaatgaagatgaaaggaatgaatgggtgactgaa
ctgaggaactgcaccggggggcccaagcgccccataactttgatcgcaggctcacctttg
accccagattattttggctatttggagctcagagggctacgatccaaactttttactgtt
gttgcttcagataaagtccttctctataagagcgcggatgattatcgcatcggagtggga
atcacatttattgacatgaacgttggaaatgtgaaagactcagatcgtcgtagttttgat
ctcaccacaccttaccgcatattcagttttatagccgagtcagagcagtcgagggagcag
tgggtgcaggccatgaggaacgctataggagaagcgctgtccaacaatgaggtggttgag
cagatctggagggagcctagcaacagcttctgcgccgactgcggcgctccacagccagat
tgggcggccatcaacctttgtgtggtgatctgcaagcaatgtgcaggagaacacagagga
ctcggtccaagtatctccaaagtacgaagtctgaagatggataagaaaatctggacagag
gagcttatccaggttttcctaaaactcgggaacgaactggtgaacagtttctgggccgct
aacgtcccgccaagtgaagccctatcgccctctagctgcagtgaagacagacgccgcttc
atctctaacaaatatcgccagggcaaatacagaaagtaccatgcgctgtatgggaaccag
agagagctcaacaatgccctctgcataaatgtgcagtgcagtgatttgctggagacgctg
agcctgattttctgcggtgcagatgtgaattgttcaaccggtatggcaaattgtccgtcc
cctgagtccctagccaatgcacattcccaacctctgcaggccgagttaatcaaacacaac
ctcaacacagagctgccccagttacaggtggaggctgatatggatctgaaacattaccca
ccgccgccttgcgtgtcttacgagggctacttgttcaaaactgcatccatggggcgggct
gtggcggagcgcaaagtgaaagaggagttcagtcgtcgttggtgcatgctaaatgatggc
atcttcagctactatgaacacgacaagagcaccaatcctaacgggacacttaaagcatcg
gaaattgtttgtttggctgtcgattcgcctgagaaacacgggtatgactttacctttgaa
gtctactcagaatctgagcgtatttatctgtttggcactgatgaaccagacagccacaag
gagtgggtcaagtgtattgccaagacttttatcccagccacagcagagcctttgctaaga
ctgagttttgagcggatcggacggctgaagtgtaaagatggcttgaacttacagaaatcc
aaggtcggctggttcgctctgactggctctactcttcatgtttacctggagaacagcaag
ggagaggagatccacctgcgtaaactcaatgaactttcaattcaacaagacaatgaagtg
ttggttcttgtggagaaaggcaggactctgtatatcgagggagaaaggaagttggacttt
gccggctggtgtggggctatccaagcagcggcagggagcggaggagacacactgagtcag
cagcagctcacagacacagatatacctgtcattgtactcagctgcatcgactacatcacg
cagtgcggtatgacatcggagggaatttatcggaaaagcggcgtgaactcccgtgtggca
gccttgtgcgacagattccgccgagatgctcgtagccttcgattgaaggagggagagcat
caagtggatgacgtctccaacactctcaaacgcttcttcagggagttagaggaggggctg
tttacatcagagtatgcctacagctggctcgccatcactgccttacaggatgaaaatacc
aaaatctcagaatacaaggccctattggacagactgcctcgcgtcaacaaggctacacta
caagccctcatcaaccacctctactgcgtgcagcgtttctctgacctaaatcagatgaac
ctccacaacctggccatagtgttcggtcccactctgttccaaaccgatgggaaggactac
accgccggccgagccgtagaggacctcatagagcactacacagtcatatttgaggtggat
gagcagcagctgaagaggcaactggaggagatcaaagccatcatcagaatgagagacaac
ctcaacaccaagtttccttcacgtccgagattcgaaggtgacggccacttcatctgtact
gtatatctggaagagcggaaggacacagcagagcagcatgtcaagattcctggttcaatg
actgcagcagagctggcgtacgaggttttggacaggcgcaacattccagtcaaagataag
gattactggagctgttgggaggtctgcgaggaaatcgaacgtccgctgcattatcaggag
cgagtcttgcccattcttcactctgctggcaatgagtcacatcttctcatcaagaaacag
cctgctatggacgccatgatcacgtaccttgccactaaagtcgacgtatccaagcacggg
atgatgaaatacagagaagagcgaagcatcctgggtttggggctatcctctggaaatttc
cacgatcgatttttcattctcaatgtcacctctctcagaatgtacaaggatgttagaagt
aaccgtatagaacgggaatggatcataaaaaacttgaagatttacttgggaatcaagaag
aagctccgtcctcctacatgttggggtttgactgttgtgtatgagagcaagaaacaagaa
aaaccagagagacaacagtggtatctctgctgtgaaacccagtcggagatgagggagtgg
tacgctacatttcttagtattcagaacgatggcaacctgtggccccaggacggagtccag
cagaacccggtgagccgtgtgctgccggacactcgtcacggtaacgtgtcactgatccca
ttgcgtggcagtgagaatgagatgcggaacagcgtagcagctttcagccaagacgcgctt
gctctccttagagatgtgcggtaa
DBGET
integrated database retrieval system
