Xiphophorus couchianus (Monterrey platyfish): 114161686
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Entry
114161686 CDS
T05908
Name
(RefSeq) transcription factor RelB-like isoform X1
KO
K09253
transcription factor RelB
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114161686
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
114161686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114161686
Transcription factors [BR:
xco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
114161686
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
114161686
NCBI-ProteinID:
XP_027900972
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Position
18:complement(22553760..22568319)
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AA seq
577 aa
AA seq
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MKDMDFFTAEEPTPSSGINAFSHICTPNGELDLISEIINGCSEQQNGSLPAPLPLPPPPD
RCWRTTEGEDVLNQDGFTLLQNLQPASKPVLVPRGTAPNPAPLREMASGHPSHKPVGPTG
RGRGPSCSLTPKGGVPSQSLQSNGNMLERILEKPKLVVVEEPKDRGMRFRYECEGRSAGS
ILGASSTDNNKTQPTIEIQGPIDHIKKVTVTVSLVTKDYPHRPHPHCLVGKDCVAGSGIC
VVCFNPHTARRHSFANLGIQCVRRRELDVSLQKRRNQNIDPFKTGNTKGIEDMDMNAVRL
CFECLLEWDDGRKDSLCPVISKPIYDKKATTTSELKICQLNLSKGSCRGKTEVYMLCDKV
QKDDIEILFRHGSWKANGEFAQTDVHRQIAIVFKTPPYQDQDITEEVEVNVLLRRVSDQM
ESEPVSFMYLPHNPDPYEVKRKRATIKRDISVTEPAPSSKQTFNFPMETQNVMSSDDSHL
AFLSSPETGMMDHGVLDEETVLDFLQFLAEQNLPGDTAADGNAFPCLNVNLNANYNHFPP
DFSQFNDIQFNMLVTDSQMAQSEQQDSVMQVKTEEEL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatatggacttcttcacagccgaggagccaacacccagttcggggatcaacgcg
ttttcgcacatttgtactcccaatggcgaactcgatctaatttcagaaatcatcaatggc
tgcagcgaacagcagaatggctcccttcctgccccacttcctcttcctcctcctccagac
cgctgctggaggacgacggagggtgaagacgtcctaaaccaggacggcttcaccctcctg
cagaacctccaaccggcgtccaaacccgtcctggtacccagaggcactgcacctaatccc
gctccactgcgagagatggcgtccggtcatccttcccacaaacccgtgggccccacagga
agaggtcgaggcccgtcctgctcgctgacccccaaaggcggcgttccctcccaaagcctg
cagagcaacggcaacatgctggagcggatcctggagaagcccaagctggtggtggtggag
gagcccaaggaccggggaatgaggttccgctacgaatgcgagggtcgctcggccggcagc
atcctgggggcgtccagcaccgataacaacaagacgcagcctaccatagagattcagggt
cctattgaccacataaagaaggtcacagtgaccgtttctttggtcaccaaagactatccc
caccggcctcacccgcactgccttgtgggtaaagactgcgtagctggctcaggaatctgt
gtggtctgctttaaccctcataccgcccgacgtcacagctttgctaatctcggcatccag
tgtgtgagaaggagagagctggacgtgtcgctgcagaaaaggagaaaccaaaatatcgac
ccttttaaaactggtaacactaaagggatcgaggacatggacatgaacgcggtgcgtttg
tgtttcgagtgcctgctcgagtgggacgacggcaggaaggactcgctctgcccggtcatc
tccaagccgatctacgacaagaaggccacgaccacgtcggagctgaagatctgccagctg
aacctgagcaaagggtcctgcagaggcaagacggaggtctacatgctgtgtgacaaagtg
cagaaagacgacatagagatcctcttcaggcatggctcgtggaaggcgaacggcgagttc
gctcagacagacgtccaccggcagatagccatcgtgtttaagacgccgccctaccaggac
caagacatcacggaggaggtcgaggtcaacgtcttgctgcgccgcgtctcggaccagatg
gagagcgaacccgtctccttcatgtacttgccgcacaatcccgatccgtacgaagtgaag
cgaaagagagccacgattaaacgggacattagtgtgacagagccagcaccatcttcaaag
cagaccttcaacttccccatggagacacaaaacgtgatgtcatcggatgacagtcacctc
gcctttctgtcttctcctgaaacgggcatgatggaccacggcgtcctggacgaagagacc
gtgctcgacttccttcagtttttggccgaacagaacttgccaggcgacaccgccgcagac
ggcaatgctttcccctgtctgaatgtgaatttaaacgcaaactacaaccactttccgccg
gacttttcccagtttaacgacatccagtttaatatgcttgtcactgacagccagatggca
cagtcagaacagcaggacagtgtcatgcaggtgaaaacagaggaagagctatga
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