Xiphophorus couchianus (Monterrey platyfish): 114161699
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Entry
114161699 CDS
T05908
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114161699
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
114161699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
FXa_inhibition
Plasmod_Pvs28
EGF_3
EGF_Teneurin
EGF_2
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
114161699
NCBI-ProteinID:
XP_027900999
LinkDB
All DBs
Position
18:complement(838285..895277)
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AA seq
1788 aa
AA seq
DB search
MRLGLLCLWTGWMLRSAASQPPQPEDGGVRPGEQLQTDPGGVRTGFRSQSTGEPAGGARR
RAALSGPRVCGGRCCLGWTVSPKTRRCTKPRCFPSCRNGSSCGLPNNCLCGKGFYGIRCQ
FSKVPLPVGRPPETSSHPASTTTAAGPIGSSRKPEPPGSFQKPLNGNDSGPLKSGCLAGQ
AEGVKGDQGDVTLRFLNRTSPGSTGLMRADPDPERQSSDSEHVLESKPQTNRENRNPLRS
ESLELQASLEVKEDEDPTGAERRPEEMKRQIPSLREAQSVLLRNSLSQGGRGGNMAALLM
KHITREKRKLHTLTSSSSSSSSSLSTRRAFQNQRGRFDSHLAAPKVLCPLLCKNGGVCLQ
MDRCLCPANFTGKFCQIPIPPPGAASTNEIVQPPRPSSATANQELMRSEFLLPLGQNRAA
PPSADSRMVKVRVQHPKEASVKIHQVMKVSGSSPAPRTLSSSSSGSAGAPAQAPLPAGGA
RIQAQTLRGGGTYNPQSGFKYCFREVKDGQCSSPLPGLRSREVCCRGIGKAWGLTDCSLC
PEAPGQRNSSCPVGFERTNGTQCVDVNECLQPGLCENGICVNTRGSYSCVCRLGFILDAT
HGICISQSVISEEKGQCYRVLGSSRGPYTCSLPIVRNITKQICCCSRVGKAWGPDCVRCP
YFGSVAFKEICPAGPGYHYSASTLQISQRADGDSTGREFLLTALDAADPVPGSSGVIAFG
SQQRPSSSGSPSGTRTGPVQVQVPAQVGLTASSRPTAPAGSATRNAQTRLEVQHGRSDIQ
NIRLDLALARPQPPLAFPSSVLRPDPAPVPADSLPTPAPPRTSERGSRPGPEPPGPERRP
AANPTNRPARVQPVRGVCQIRPGVCERGRCVDLPGGKHTCECDEGFQPNAQRSRCFDVDE
CQQNPCSNGRCENSPGSFRCVCYHGYRLAGNTCEDVDECVDPLQCPGQECVNMPGSYRCS
PCQPGLGLLNGICTDIDECRLSPCSGGRCENTPGSFRCVCRHGYRLQNNTCTDVDECAEP
SQCPGQMCVNSVGSYRCVSCRPGYTLTNRQCTDVDECASAGACDAEQVCVNSVGSFRCDC
RPGYRSSGLGRRCTDVNECLEGDFCFSRGECVNTPGSYTCVCSPGFRLSENRTACLDVDE
CVRPGVCSDGRCVNTDGSFLCQCNSGFSANPEQTACLDVDECVSSGGSVCPSRRCENIIG
SFRCLAACQAGQRVAADGSCVGPAVSAPASAAAAATTFSLPAAPQLPSSASESGSRPEST
HSSSSSSSSSGVQISAVDVSAVLHRQSAAQPGDLRDCYYNLAAGGCSLLAANTTQQECCC
TAGEGWGRGCRAHACPAPNTADFLSLCPSGWGYVTVGSSAFSYSDVDECKRFQPEVCKNG
VCVNNIPGYRCYCSSGFVYSSALLECIDYDECEEESCVGGECVNTVGSFYCSCPPPLVVD
DTQSNCVNASHLTRDENLSVCWQHVSADLLCQSPLLGAQVTFIDCCCFYGEGWGMGCALC
PRTDSEEYASLCSSYSAAAFPGSFPDSGRPETGPGRGAAPYGPEFFPAQPLPDVDFSQDY
IDYSLAGRSRSDFRARPPVSFSPPDDAYGGSEFSPGFYPDGDYGSPDGSAPRTPTFRLPA
DPRSDIAFVPRPLPPSRSDPPPLSLAPRPGPPYGDQEEGGGFRGWRPGAGLPPFTDRGGG
EGGGPRRVYERRYETHASLSATEDCGILHGCENGQCIRVAEGYTCDCYVGFELDLTSMSC
IDINECEDAAALPFPCVNARCVNTEGSFRCVCRRGYVMSRRRNHCIAA
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgcggctggggctcctgtgtctgtggaccggctggatgctccggagcgccgcgtcgcag
cctcctcagccggaggacggaggcgtgcgacccggcgaacagctgcagaccgacccgggg
ggagtccggaccgggttccggagccagagcaccggagaaccggcaggtggagcccggagg
agagcagctctgagcggacctcgtgtttgtggaggtcgatgttgtctcggctggactgtg
tcccctaaaaccaggaggtgcaccaagcccagatgttttccttcctgccgtaacggatca
tcgtgtggacttcccaacaactgtctgtgcgggaaaggtttctatggcatccgctgccaa
ttttccaaagttcctcttcctgtgggaaggcctccagagacatccagccatcctgcctcc
acaaccacagcagctggaccaatcgggtccagtcggaaacctgaacctccaggttcgttt
cagaagccattaaacggtaacgactctggtcctctgaagtctggatgtctagcaggtcaa
gctgaaggcgtgaagggggatcaaggagatgttaccctaaggtttctgaaccgaacgtct
cccggaagcacaggtctgatgagggcagatccagatccagagaggcaaagctcagattca
gaacatgtcctggagtccaagccccaaactaacagagaaaacaggaacccactgagatcc
gagtccctggagctgcaagcaagtctggaagttaaagaagatgaggatccgactggagca
gagaggaggccagaggagatgaagaggcagatcccaagtctgagggaggcccagtccgtt
ctgctgagaaactctttatcacaaggaggaagaggaggcaacatggccgccctgctgatg
aagcacataacaagagagaagaggaagctacacacactgacttcttcctcctcctcctct
tcctcctcactatccaccaggagggccttccagaaccagagaggtcggttcgactcccac
ctcgctgctcctaaagtcctctgcccgctgctctgtaagaacggcggcgtctgcctgcag
atggaccgctgcctctgccccgctaacttcaccgggaagttctgccagatccccatcccg
ccccccggcgccgcctccaccaatgagatcgtccagccgccgcggccctcctccgcgaca
gccaatcaagagctgatgcggtcggagttcctgctgccgctcggccagaaccgggcggcg
ccgccgtccgcagactcccgcatggtaaaggtcagagttcagcaccccaaagaggccagc
gtgaagatccaccaggtgatgaaggtgtccgggtccagtccggccccgcggaccctctcc
tcctcctcttcgggttcggctggcgctccggcccaggctccgcttccagcaggtggcgct
agaatccaggcccagactctgaggggcggcggtacctacaacccgcagtctggcttcaaa
tactgtttcagagaggtgaaagacggacagtgcagctctccacttccgggtctgaggagc
agagaggtgtgctgcaggggaatcgggaaggcctggggtctcaccgactgcagcctctgt
cctgaagctccaggtcaaagaaacagcagctgtcctgttggcttcgagcgaaccaatgga
acgcagtgtgtcgatgtgaatgagtgcctgcagccagggctgtgtgagaacggcatctgt
gtgaacaccagggggagctatagctgtgtgtgtcggttggggttcatcctcgacgccaca
catggaatctgcatctcgcagagcgtgatttcagaggagaagggtcagtgctaccgggtc
ctgggctccagtcggggtccgtatacctgctccctgcccatcgtccggaacatcaccaag
cagatctgctgctgcagccgggtcgggaaggcctgggggcccgactgcgtgcggtgcccc
tactttggttcagtcgcctttaaggagatctgtccggccggcccgggttaccattactcg
gcttccactctgcagatcagccaaagagcggacggcgattcgacgggccgagaattcctg
ctgacggcgctggacgccgcagatccagttcccgggtccagcggtgttatagccttcggt
tctcagcagagacctagttcgtccgggtcaccgtctggtaccagaaccggtccagtccag
gtccaggtccctgctcaggtaggtctgaccgccagttccagaccgacggcccctgctggt
tcagcaacccggaacgctcagacccgactggaggtccaacatggccgatcggacatccag
aatatccgactggacctggctctggcgaggccgcagccgccgctggcgttcccctcctct
gtattgcgacccgacccggcgccggtaccagcagactctctgccgaccccggccccgccc
cggacctcagagcgcgggtccagacctggaccagaaccgcctggtccggagagacggccg
gctgcaaacccgaccaaccggcccgccagagtccagcctgtccgtggtgtgtgtcagatc
agaccaggtgtgtgtgagcgtggccgctgcgtggatctgccaggtgggaaacacacctgt
gagtgtgatgagggattccagcccaacgctcagcggagccgctgcttcgatgtggacgaa
tgtcagcagaatccctgcagtaacgggcgctgtgaaaactccccagggagcttcaggtgt
gtctgttaccatggttacaggctcgctgggaacacctgtgaagacgtggatgagtgtgtg
gatccgctgcagtgtccgggtcaggagtgcgtcaacatgccgggttcgtaccgctgctcg
ccctgccagccgggactcgggttactaaacggaatctgcacagacatcgacgagtgccgg
ctgtccccgtgctccggtggccgctgcgagaacacgcctggcagctttcgctgcgtctgt
cgccatggttacaggctccagaacaacacctgtacagacgtggacgagtgcgcggagccg
tctcagtgtccggggcagatgtgtgtgaactctgtggggtcgtacaggtgtgtgtcgtgt
cgtccaggatacacactgaccaacaggcagtgcacagacgtggatgagtgtgcgagcgcc
ggagcgtgtgacgcggagcaggtgtgtgtgaacagcgtgggctcgttcaggtgcgactgt
cgccccggataccggagctccggcctgggcaggcggtgcacagacgttaacgagtgtttg
gagggcgacttctgcttctccagaggggagtgtgtgaacacacctggatcatacacctgt
gtttgctcacctggattcaggctgagtgagaacaggacggcctgcctcgacgtggatgag
tgtgtgaggcccggtgtgtgttcggacggccgctgtgtcaacaccgacggctccttcctg
tgtcagtgtaactcgggcttcagcgccaacccggagcagaccgcctgcctcgacgtggac
gagtgcgtgtccagcggcggctccgtttgcccgtcgcggcggtgtgagaacatcatcggc
tcgttccgctgcctcgccgcctgccaggcgggtcagcgggtcgctgccgacggctcgtgc
gtcgggccggccgtgtcagctccagcctctgcggcggcggcggcgacaacgttctcgctg
cccgctgcaccacagcttccatcgtctgcttcagagtccgggtcccgccctgagtccaca
cactcttcctcctcttcctcttcctcctccggggtccagatcagtgcggtggacgtttct
gcggttctgcaccgccagtctgcggcgcagcccggtgatctgagggactgttactacaac
ctggcggcaggcggctgcagcctgctggcagccaacaccacccagcaggagtgctgctgc
accgcgggggagggctgggggcggggctgccgcgcccacgcctgccccgccccaaacaca
gctgacttcctgtccctgtgtcccagtgggtggggctacgtgacggtgggatcgagcgcc
ttcagctactcagatgtggacgagtgtaagcgcttccagcctgaggtgtgtaagaacggc
gtgtgtgtgaacaacatcccaggctacaggtgctactgctccagcggcttcgtctacagc
tccgccctgctggagtgcatcgattacgacgagtgtgaggaggagagctgcgtgggcggc
gagtgtgtgaacacggtggggtcgttctactgcagctgcccgccgccgctggtggtggac
gacacgcagagcaactgcgtcaacgcctcgcacctcaccagggatgagaacctgtccgtg
tgctggcagcacgtcagcgccgacctcctgtgccagagtcccctgctgggggcgcaggtc
accttcatcgactgctgctgcttctacggcgagggctgggggatgggctgcgccctctgc
ccccgcaccgactcagaggaatacgcctctctgtgcagctcctactctgcagcggcattc
ccaggaagcttcccagactccggcagaccagaaaccgggccggggcgaggagctgccccc
tacggtccggagttctttcctgcacagccgcttcctgacgtagatttcagtcaagactac
atcgactactcgctagcagggcgcagcaggtccgacttcagggccaggccgcccgtctcc
ttcagcccgccggacgacgcctacggcggctctgagttcagccccggtttctacccggat
ggagactacggctccccagacggctccgcgcccaggacgcccaccttccggctccctgcg
gacccccggtccgacatcgccttcgtgccccggccgctgcctccgtccagatccgaccca
ccgccgctcagcctggcgccacggcccggaccgccgtacggtgaccaggaggagggagga
ggcttcagggggtggaggccgggggcggggcttcctccgttcactgacagaggaggcggc
gagggcggcgggccacggagggtgtatgagaggcgctacgagacgcacgccagcctgagt
gccaccgaggattgtgggattctgcacggctgtgagaacggccagtgcatccgcgttgcc
gagggttacacctgcgactgctatgtgggcttcgagctggacctgacctccatgagctgc
atcgacattaacgagtgtgaagacgctgctgcgctgccgttcccgtgcgtcaacgctcgc
tgcgtcaacacagaaggctccttccgatgcgtctgcaggagaggttacgtcatgtcgcgc
agacgcaaccactgcatcgctgcttag
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