Xiphophorus couchianus (Monterrey platyfish): 114161723
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Entry
114161723 CDS
T05908
Symbol
rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114161723 (rnf169)
03400 DNA repair and recombination proteins [BR:
xco03400
]
114161723 (rnf169)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
114161723 (rnf169)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
114161723 (rnf169)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
114161723 (rnf169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
114161723
NCBI-ProteinID:
XP_027901067
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Position
18:1476276..1481304
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AA seq
595 aa
AA seq
DB search
MATAGFAEQRSSQAGTAADTSRSRPGTAGAARCRSGSGPPEKCSACSESRSGSGTACSRC
VARRVPSREQRFRRRSDPERGSSRAGKRDSESLRGVFVCPTLPKSVDAPAAPAAKLKVSL
GVFRKSLPPEYGQESVPPLPVQLLASDDREEIRRWSCLMGKDESGSVRRAVEPGVLSDSE
NEEPISRRIRNISAFIRKTKNSSAVSSGSRRSRSCTDPMEDRGGKMKAIIPPAAVMEQVG
ISHSSAAGILLSSENSRSISAPITAPDRRLTWRAVLTSSAPLGLPPPPARAERSISPESN
DSISEELNHFKPIVCSPCTPPKRLPDGRLLEPTVIKATPRNLSRSLQKATSYEASPAVLQ
KWRQIELDRQGLKVSSRATLTSPAPEPEGGGASKALQHRGAVALANRRRLLFEPPDIDGF
QKQSVKIRVPAVRYGAALRGCSDLESAGAAPEHGGGPAPFGRKHSFSPCNNSGFRPGKLV
PKDSLSPRKEWDAICNQSTSRRGKKRNQKTKHLDPALDPVLDPAPKRSRPGGQQEAPCSV
QQEWQDRALALKLQRQFDLEVRRASPDRYFLRSWRSTQNRRRRGLRTSRPISKKL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcagggttcgccgaacagcgatccagtcaggccggtaccgccgcagacacg
tcccggtcgcggcccggcacggcaggagccgcccggtgccgctccgggtccggcccgccg
gagaagtgctcagcttgctcagagagccggtctgggtccgggacggcctgttcccggtgc
gtggcccggagagtcccgagcagagagcagcgattccggagaagaagtgaccccgagaga
ggcagcagcagagcgggaaagagggacagcgagagcctcagaggcgtcttcgtctgtccg
accctgccgaagtctgtggacgctcctgcggctccggctgcgaagctcaaggtgagtctg
ggagttttcaggaagtctctgcctcccgaatatggtcaggaatctgtcccgcctcttcct
gttcagctgctggcgtccgacgaccgggaggagatccggaggtggagctgcctgatgggg
aaggatgaatccgggtcagttagacgcgccgtggagccgggggttctgtccgactctgag
aacgaggagcccatcagcaggaggatccggaacatctccgccttcatcaggaaaaccaag
aactcctcagccgtcagcagtggttcccgaaggagtcggagctgcaccgaccccatggag
gaccggggagggaagatgaaggcgatcatcccgccagcggccgtcatggagcaggtgggc
atcagccacagctccgcagccggcatcctgctgtcgtcagagaacagccgctccatctcg
gcgcccatcacggcgccggaccgcaggctcacctggagggcggtgctgacatcatcggcg
cctctgggtctgccgccgccgccggcccgcgccgagcgctccatcagccccgagagcaac
gacagcatctcagaggagctcaaccactttaagcccatcgtctgctcgccgtgcacgccg
cccaagcggctgcccgacggccgcctgctggagcctaccgtcatcaaggcgacgccgcgc
aacctgagccgcagcctgcagaaggccaccagctacgaggcgagcccggccgtcctgcag
aagtggcggcagattgagctggaccggcaggggctgaaggtcagctccagggccacgctc
acaagcccggcccctgagcccgaagggggcggagcctccaaggcgctgcagcaccgcggc
gccgtggcgctggccaacaggaggcggctgctgttcgagccgccggacattgacggcttc
caaaaacagtcggtgaagatccgcgtccccgccgttcgctacggcgccgccctcagaggc
tgttcggacttggagtcggccggtgctgcaccggaacacggtggcggcccggcgccgttc
ggacggaaacactcgttctctccgtgcaacaactccgggttccgacccggaaaacttgtg
ccaaaggactcgttgagtcccaggaaggagtgggacgccatctgcaaccagtctacctca
aggaggggcaagaagaggaaccagaagaccaaacacctggatccggctctggacccggtt
ctggacccggcgccgaagaggagccggcccggcggccagcaggaggcgccgtgttccgtc
cagcaggagtggcaggaccgagcgctcgccctcaaactgcagagacagttcgacctggag
gtccgcagggccagccccgaccgctacttcctgcgctcctggagatccacccagaaccgc
aggaggcggggcctgaggacgtcccggccaatcagcaagaagctgtga
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