Xiphophorus couchianus (Monterrey platyfish): 114161751
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Entry
114161751 CDS
T05908
Symbol
rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114161751 (rffl)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
114161751 (rffl)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
114161751 (rffl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
Prok-RING_4
MUG2_C
Phage_lysis
DUF6964
Motif
Other DBs
NCBI-GeneID:
114161751
NCBI-ProteinID:
XP_027901123
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All DBs
Position
18:1305147..1310768
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AA seq
340 aa
AA seq
DB search
MFACCCNWLCLDSTDVDPSGRADRRHQSYTNSAFNSQPSPPPPEHTCKACGGSFDTPARK
HVCVDCKKNYCSGCSAQQGLRPRLCHTCQRFYGNLLERAELMKLKVKELRDYLHLHEVST
HLCREKEELVELVLSQQSSPSGSSAPDTPTMTSDPPDPTPRISVSDLSSDASSPAPPTPE
PEAPPPDSETPPSDAELEEDDPAWDPEEAPVSGRRASLSDLKSVDDIEDLSVRQLKEILA
RNFVDYKGCCEKWELMERVTRLYQDQQNLLAANSVNAAGGGAGPAPGQEENLCKICMDSP
IDCVLLECGHMVTCTKCGKRMSECPICRQYVIRAVHVFRS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcctgctgctgtaactggctctgcctggactccacggatgtggacccgtcaggc
cgagctgacaggagacaccagtcctacaccaactcagccttcaactcccagccgtctccg
cctccacctgagcacacctgtaaggcgtgcggcggctccttcgacacacctgccaggaag
catgtgtgtgttgactgtaagaagaactactgcagcggctgctccgcccagcaggggctg
cggccgcgcctctgccacacctgtcagcgtttctatggcaacctgctggagcgggcggag
ctgatgaagctgaaggtgaaggagctgagggactacctgcacctacatgaggtctccacc
cacttgtgcagagagaaggaggagctggtggagctggtgctgagtcagcagtcgtcgcct
tccggcagctccgcccccgacacccccaccatgacctctgaccctcctgacccgacgcct
cgcatctccgtctctgatttgtcctctgacgcatcaagtccggccccgcccactccggag
cctgaagctccgcccccagactcagagactccgccttctgatgctgagctggaggaggat
gacccggcctgggacccggaggaggcgcccgtgtcggggcgacgggcctcgctgtcggac
ctgaagagcgtggacgacatcgaggacctgagcgtccggcagctgaaggagattctggcc
cggaactttgtggattacaaaggctgctgtgagaagtgggagctgatggagcgcgtgacc
cggctgtaccaggaccagcagaacctgctggcggctaactctgtgaacgctgcaggtggc
ggcgccgggccggcgccgggccaggaggagaacctctgtaagatctgcatggactcgccc
atcgactgcgtcctgctggagtgcggtcacatggtcacctgcaccaagtgcggcaagcgg
atgagcgagtgtcccatctgccggcagtacgtgatccgggccgtgcacgtcttccggtcc
tga
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