Xiphophorus couchianus (Monterrey platyfish): 114161772
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Entry
114161772 CDS
T05908
Symbol
tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xco03016
]
114161772 (tsen34)
Enzymes [BR:
xco01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
114161772 (tsen34)
Transfer RNA biogenesis [BR:
xco03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
114161772 (tsen34)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
114161772
NCBI-ProteinID:
XP_027901145
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All DBs
Position
18:1630294..1632798
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AA seq
286 aa
AA seq
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MEAELQPQEERSPAPVVGLSLCDSAPLLWRLQDLKAVRSEGLVGALLGSLPRTPRQNVRL
GRPLLLLPEEERLLGERGGAAALPAQNQEAAGGELQQRYTEEQQRSFEEQSVLALEDRKS
ALVRAMTSSSGSDPASDEALQHRLLDLEQNFSFPRSALAVQLSTARAGLSHCPEARAFLE
ADWPIRAQRCPRREARFQVFRDLRGRGFFLTSAGKFGGDFLVYPGDPLRFHAHFIAICLA
LDESVCLLDVLCAARLGSNVKKTVLLCSPAPDGPVRYTSLQWSGMV
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggagctgcagcctcaggaggaacggagccccgcccccgtcgtcgggctgagt
ctctgtgactccgccccgctcctgtggcggctccaggacctgaaggccgtgaggtccgag
ggcctggtgggggcgctgctcgggtcgctgcccagaaccccccggcagaacgtccgactg
ggccggccgctgctgctgctgccagaggaggagaggctgctgggagaacggggtggcgcc
gccgctctgcccgcccagaaccaggaagcggcgggcggggagctgcagcagcgttacacg
gaggagcagcagaggagcttcgaggagcagagcgtcctcgctctggaggacaggaagtcg
gcgttggttcgagccatgacatcatcatcaggttctgatccagcctcagacgaggccctg
cagcaccgcctgctggacctggagcaaaacttcagctttccgcgctcggcgctggcggtg
cagctgagcacggcgagggcggggcttagccactgtccggaggcccgcgccttcctggag
gccgactggccaatcagagcgcagcgctgcccccgcagggaggccaggttccaggtgttc
agggacctgcgggggcggggcttcttcctgacgtctgcagggaagttcggcggagacttc
ctggtgtatccaggtgacccgctgcgtttccacgcccacttcatcgccatctgcctggcg
ctggacgagtccgtctgcctgctggacgtcctctgtgcggcccggctcggctccaacgtc
aagaagacggttctgctgtgttcgccggcgccggacggcccggtccgctacacctcgctg
cagtggagcgggatggtgtga
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