Xiphophorus couchianus (Monterrey platyfish): 114161917
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Entry
114161917 CDS
T05908
Symbol
tsku
Name
(RefSeq) tsukushin
KO
K08130
tsukushi
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xco00535
]
114161917 (tsku)
Proteoglycans [BR:
xco00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
114161917 (tsku)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_6
LRR_14
LRR_LRWD1
LRR_9
LRRNT
LRR_EndoS
LRR_NXF1-5
LRR_RPS2
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
114161917
NCBI-ProteinID:
XP_027901382
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Position
18:12887683..12897765
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AA seq
348 aa
AA seq
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MALLLWVGLSLLLAVQSGAVRNCHPSCHCEVESFGLFDSFSLTRVDCRGMGPSVSMPITI
PLDTAHLDLSSNDMGPLSDAMLAGPGYTTLISLDLSSNKITKVSPSALSKLRYLESLDLS
YNNLESLSPSCFSGLPLAEVDLSHNSFQEFDMAVFSAKVNSEPVSVDLSHNKLVSVSATL
NGRSLHIQSVNLSVNQLVSVPNMAGLPLRYLNLDANPILKIKKGAFGQLKDLVYLSVSGL
GELHEIEPHSFSDLQNLQVLDLSNNSKLKNLSPAVFCGLDSLQELNLSGSGVTSLPTNML
SHLPSIKSITLGQSIHCWRMQKQGQFHRQMGQVQHNEELHCNVDGIVL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgctcttgtgggtcggcctgtcgctgctgctggctgtccagtccggtgcggtc
aggaactgccaccccagctgtcactgtgaggtggaaagcttcgggctcttcgacagcttc
agcctgaccagggtggactgcagaggcatgggtcccagcgtctccatgcccattaccatc
cctttggacaccgcccacctggacctgtcgtccaatgatatgggccctctcagcgatgcc
atgttagccggtccaggctacaccacgctaattagtttggacctcagcagcaacaaaatt
actaaggttagccccagtgcgttgtccaaactgcgatacctggagagtttggatctgagc
tacaacaatctggagagtctgtctccaagctgtttctcgggcctccctctggccgaggtg
gacctcagtcacaacagtttccaggagtttgacatggctgtgttctctgctaaagtgaac
agtgaacctgtcagcgtggatctgtcccataacaagcttgtgtcagtctctgccaccttg
aatggaagatctttacatattcagagtgtcaatttgtcagtgaaccagctggttagcgta
ccaaacatggcgggacttccgctgcggtacctaaatctggacgctaacccaattctgaaa
atcaagaagggagcctttggtcagctgaaagatttggtttatttgtccgtcagtggcctc
ggtgaacttcacgaaattgagccgcatagcttcagcgatctccagaacctgcaagttctg
gacctctcgaataactcgaaacttaagaatctaagccctgcagtcttctgtggactagac
tctctgcaggagctcaacttgtctggttctggtgtgacttctttgccaactaacatgttg
agccaccttcccagcatcaagagtatcactcttggacaaagcatccactgctggaggatg
caaaaacagggacagttccaccgacagatggggcaagtccagcataacgaggagctgcac
tgtaacgtagacggcattgtgttatga
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