Xiphophorus couchianus (Monterrey platyfish): 114161926
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Entry
114161926 CDS
T05908
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04514
Cell adhesion molecule (CAM) interaction
xco04517
IgSF CAM signaling
xco04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
114161926
04517 IgSF CAM signaling
114161926
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
114161926
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114161926
04090 CD molecules [BR:
xco04090
]
114161926
Cell adhesion molecules [BR:
xco04515
]
Immunoglobulin superfamily
Nectin family
114161926
CD molecules [BR:
xco04090
]
Proteins
114161926
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
Ig_3
C2-set_2
ig
I-set
Ig_2
Ig_PVRIG
Ig_VEGFR-1-like_5th
Keratin_assoc
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
114161926
NCBI-ProteinID:
XP_027901396
LinkDB
All DBs
Position
18:28111686..28163974
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AA seq
554 aa
AA seq
DB search
METRPTNRRTVPNDGMRLLTSFFILCGAAAGVSSNQVVVPDKVNAVLGKNITLGCRILVE
PNLSLTQVSWERRLPSGPITLAVFNPEYGTSYAPEYGKRISFVSPSIRDATIIIEGVGFA
DIGSYTCKVATFPLGNTQASTFVNVSVEPKVYVSAGPAALLDGGDEALVATCIAERGRPA
AEVFWEAELYGRSEKQTQEEVNGTTTVRINYMWKPQSYAQGKMLTCVVRHPTLQTEFRIR
YKLNVQFAPNISIQGIDKIWYVGQTNVRITCTAKANPPAHDYKWIRLDGAMPEGVKISNN
SLSFTRPLERNDSAIYRCEVTNDIDRSTHNVNFWVQDPPPTTAAPSTTASPIRYASGTGT
DMDRRRALFTSPTLASVHDSSLGTIIGGAVGGVLFLVLLLILGGACFMRQRRTFRGDYYT
KQYLGPSDMQKESQIDVLQPHELQEVYGDKTSKGSQELKPKLGGDIIYPDYTPERKDRDD
WNDRGDGPRVTKEGNYYPDHYNNQNMHPCGPPVHSPIVNNGSPYLPEDCYENGTDSDYVS
HMDGSVISRREWYV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggagactagacccacgaaccggaggacagtaccgaatgacggaatgcgacttttaacg
tcctttttcatcctgtgcggagccgccgcaggtgtaagcagtaaccaggtggtcgtccct
gacaaagtgaacgcggtgctggggaagaacatcacgcttggctgcaggatcctggtggag
cccaacctgagtctgactcaggtctcctgggaacgccgtcttccatcgggtcccatcacc
ttggcagtgttcaaccccgagtacggaacctcgtacgccccggaatacggcaagcgcatc
tcgtttgtttccccgtccatacgggatgccactatcatcatcgaaggagttggttttgct
gatatcgggtcatacacctgcaaagtggcgacttttcctctgggcaacacacaagcgtcg
acctttgttaacgtttcagtggagcccaaggtgtacgtgtctgcaggccccgcggctctc
cttgacggcggggacgaggcgctggtggccacctgcatcgcggagcgcgggcggcccgcc
gctgaggtgttctgggaggccgagctgtacgggcgatctgagaagcaaactcaggaggaa
gtcaacggcaccaccacggtgcgcatcaactacatgtggaagccccagagctacgcccag
ggaaagatgctcacctgtgtggtgcgccacccaactctgcagacagagttccgcatacgc
tacaagctgaatgtgcagtttgcaccaaatatatccatacaaggaattgataaaatctgg
tatgtgggtcaaacaaacgtgagaatcacctgcacagccaaagccaaccctcctgcccat
gactacaaatggatcaggttggatggagccatgccggagggtgttaagatttcaaataac
agcctttctttcacacgcccgctagagcgcaatgattctgcaatctatcgctgcgaggtg
actaatgacattgatcgcagcactcacaatgtcaacttctgggttcaagatccccccccc
accactgcggcccccagtaccaccgcctcccccatccgctacgcgtccggaaccggaaca
gacatggaccgccgccgagccctgttcacctcccccaccctggcctcggtccacgacagc
agcctgggcaccataatcggcggggcagtgggcggcgttctcttcctggtcctcctgctc
atcctcgggggcgcttgttttatgcgccagcgcaggaccttcagaggggactactacacc
aagcagtacctgggaccctccgacatgcagaaggagtctcagatagacgtcctacagccg
cacgagctgcaggaggtttacggggacaagacgagcaagggcagccaggagctgaaaccc
aaactgggcggggacatcatttaccccgactacactccggagcggaaggacagggacgac
tggaacgacaggggggatggccccagggtcacgaaggaggggaactattacccagatcac
tacaacaaccaaaacatgcacccctgcgggcctcccgtgcacagccccattgttaacaat
ggctccccctaccttccggaggactgctacgaaaacggtacagacagcgactacgtgtcg
cacatggacggatctgtgatttcacgcagagagtggtatgtgtga
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