Xiphophorus couchianus (Monterrey platyfish): 114162087
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Entry
114162087 CDS
T05908
Symbol
tnfaip1
Name
(RefSeq) BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 isoform X1
KO
K15074
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114162087 (tnfaip1)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
114162087 (tnfaip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB_2
BTB
BTB_3
Motif
Other DBs
NCBI-GeneID:
114162087
NCBI-ProteinID:
XP_027901669
UniProt:
A0A3B5LIP4
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Position
18:complement(31371173..31384016)
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AA seq
326 aa
AA seq
DB search
MSGERCPPQNHSQDDPTSPHPLVFCPKTKTCGYRGAVTLGNKYVRLNVGGILFFTPLQVL
TSQNSLLGAMFGGKTEVFTDKEGWVLIDRSGKHFNSILNYLRDGTVTLPKGRQAVQELLA
EAKYYLIQGLVELCQNTLQGNKEQPMCVIPVITSCKEEEQLVQSSSKPVVKLLYNRSNNK
YSYTSNSDDNLLKNIELFDRLSLSFNSRVLFFKDVIGDEICCWSFYGQGRKLAEVCCTSI
VYATEKKQTKVEFPEARIYEETLNTLLYETLPLPDNSLLEATRRSYNNCGSLSEEEEGPG
GTELRERVRRIHIKRYSTYDDRPLGH
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggagcgctgcccaccacagaatcatagccaggatgatcccacctctccacat
ccccttgtgttttgtcccaagaccaaaacctgtggttaccggggagcagtgactctgggc
aacaagtatgttcgactcaatgttggagggatactctttttcaccccactgcaggtgctc
accagccagaactccctgctgggagccatgttcggtggaaaaacggaagtcttcactgat
aaggaaggttgggtcctgatcgaccggagcggaaaacacttcaacagtatcctgaattat
ctgcgtgatggtactgtcaccttacccaaaggtcgtcaggctgtccaggagctgctggct
gaggcaaagtactacctcatccagggccttgtagagctctgtcaaaatactctgcagggc
aataaagagcaacctatgtgtgttatacctgtgattacttcctgtaaagaagaggagcag
ctcgtccagtcatcctcaaagcctgtagtgaagctgttgtacaacagaagtaacaacaag
tactcctataccagcaattcggacgataacctgctgaagaacatcgagctgtttgacagg
ctgtccctcagcttcaacagccgtgtcctcttctttaaagacgtgatcggagacgaaatc
tgttgctggtccttctatggtcagggtcgcaagctggcagaggtctgctgcacctccatc
gtctacgccacagagaagaagcagaccaaggtggagttccctgaagctcgcatctatgag
gagactctgaacacgttactttatgagaccttgccactgccagacaactccctactggag
gccacccggcgaagctacaataactgtggttctctaagcgaggaagaggaagggcccggg
gggacggagctacgtgagcgtgtccgcagaatccacatcaagcggtacagcacgtatgat
gaccgtccactgggacactga
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