Xanthomonas campestris pv. raphani: XCR_0064
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Entry
XCR_0064 CDS
T01872
Name
(GenBank) YprA
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
XCR_0064
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
WHD_HRQ1
ResIII
DUF6970
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AEL04994
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Position
complement(64293..66788)
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AA seq
831 aa
AA seq
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MPPFALAPRTETAERALATTDGRPSRDGALLTERLERRYHDRITGSFTIPGREGHYAPIP
DDVPAALADALRARGISQLYSHQADAWAATQRGEHVAIVTPTASGKSLCYTLPVVSAAMT
AGAKALYLFPTKALAQDQVAELLELNRAGELGVKAFTFDGDTPGDARQAIRLHGDIVVSN
PDMLHQAILPHHTKWAQFFENLRYVVIDEIHTYRGVFGSHVTNVLRRLKRICAFYGANPQ
FILCSATIGNPHAHAQALIEERVHAITESGAPTGDKHVLLWNPPVVNADLGLRASARSQS
NRIARIAIKSGLKTLVFAQTRLMVEVLTKYLKDIFDHDPRKPARIRAYRGGYLPTERREV
ERAMRAGTIDGIVSTSALELGVDIGALDVVILNGYPGSVAATWQRFGRAGRRQQPALGVL
VASSQPLDQYVVRHPDFFADASPEHARIAPDQPLILFDHIRCAAFELPFIADEPFGPIDP
LVFLEALAESEVIHQEGDRWEWIADSYPANAVSLRSVADGNFVVVDKTDGKQQIIAEVDY
SAAALTLYEGAIHMVQSTPYQVERLDWEGRKAYVTRTHVDYYTDSIDYTKLKVLDRFDGG
VAGRGDSHHGEVHVVRRVSGYKKIRYYTHENIGYGPVNLPDQELHTTAVWWQLPQATLGK
AFASKQDALDGFLGAAYALHVVATVAVMADARDLQKAVGNGDGAWFAVADQTGRGQLRGV
DEGEEGAVELQQAFVPTVYLYDNFPGGVGLSEPLWLRQAELLQRADELVRRCDCTAGCPA
CVGPVLAAHEEGKGESPKSLALTVLALLFDPDAPLRHATHVDDDLALDVLA
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgtttgccctcgctccccgcaccgaaaccgccgaacgcgccctggccaccacc
gatggccggcccagccgcgacggcgcattgctcaccgagcgcctggagcggcgctaccac
gaccgcatcaccggcagcttcaccatccccgggcgcgaaggccattacgcgccgattccg
gacgacgtgccggcggccctggccgatgcgctgcgcgcgcgcggcatcagccagctctac
agccaccaggccgatgcctgggcggccacccagcgcggcgagcatgtggcgatcgtgacg
cccaccgcctcgggcaagtcgctgtgctacacgctgccggtggtgagcgcggccatgacc
gccggcgccaaggcgctgtacctgttcccgaccaaggcgctggcgcaggaccaggtggcc
gagctgctggagctcaaccgcgctggcgagctgggcgtgaaagccttcaccttcgatggc
gatacgcccggcgatgcgcgccaggcgatccgcctgcatggcgacatcgtggtgagcaac
ccggacatgctgcaccaggcgatcctgccgcatcacaccaagtgggcgcagttcttcgag
aacctgcgctatgtggtgatcgatgagatccacacctaccgcggtgtgttcggcagccac
gtcaccaacgtgctgcgccggctcaagcgcatctgcgcgttctatggtgccaacccgcag
ttcatcctgtgctcggccaccatcggcaacccgcatgcgcacgcgcaggccttgatcgaa
gaacgcgtgcatgccatcaccgaatccggcgcgcctaccggcgacaagcacgtgctgctg
tggaacccgccggtggtcaatgccgacctgggcctgcgcgcctcggcgcggtcgcagagc
aaccgcatcgcgcgcatcgccatcaagagcgggctgaagacgctggtgttcgcgcagacg
cgcttgatggtggaagtgctgaccaagtacctcaaggacatcttcgaccacgacccgcgc
aagccggcgcgcatccgtgcgtaccgtggcggctatctacccaccgagcgccgtgaagtg
gagcgcgcgatgcgcgcgggcaccatcgacggcatcgtgtccacgtctgcgctggaactg
ggcgtggatatcggcgcgctggacgtggtgatcctcaatggctaccccggcagcgtggcg
gccacctggcagcggtttggccgcgccgggcggcgccaacaaccggcactaggtgtgctg
gtggccagctcgcagccgctggaccagtacgtggtgcggcacccggattttttcgccgat
gcctcgcccgaacatgcacgcattgcgccggatcagccgctgattttgttcgaccacatc
cgctgcgcggcgttcgaattgccgttcattgccgatgagccgttcggcccgatcgacccg
ctggtgtttctggaagccttggccgaaagcgaagtgatccaccaggaaggcgaccgctgg
gaatggatcgccgacagctacccggccaacgcggtgagcctgcgctcggtggccgatggc
aacttcgtggtggtggacaagaccgacggcaagcagcagatcatcgccgaggtggattat
tcggccgctgcgctcaccttgtacgaaggcgccatccacatggtgcagagcacgccgtac
caggtggagcggctggattgggaaggccgcaaggcgtacgtgacgcgtacgcatgtggac
tactacaccgacagcatcgactacaccaagctgaaggtgctggaccgctttgacggcggc
gtggccgggcgcggcgattcccaccatggcgaagtgcatgtggtgcggcgtgtgtccggc
tacaagaagatccgttactacacgcatgaaaacatcggctacggcccggtgaacctgccc
gaccaggaactgcacaccaccgcggtgtggtggcagctgccgcaggccacgctgggcaag
gcgttcgcctccaagcaggatgcgctggatggttttctgggtgcggcctatgcgctgcac
gtggtggccacggtggcagtgatggccgatgcgcgcgacctgcagaaagcggtgggcaat
ggcgacggcgcgtggtttgcggtggccgaccagaccgggcgcgggcagctgcgcggcgtg
gacgagggcgaagaaggcgcggtggaattgcagcaggcctttgtgcccaccgtctacctg
tacgacaacttccccggcggcgtgggcctgagcgaaccactgtggctgcgccaggccgag
ctgttgcagcgcgccgacgagctggtgcgccgctgcgattgcaccgccggctgcccggcc
tgcgtgggcccggtgctggctgcgcacgaagaaggcaagggcgaatcgccgaagtcgctg
gcattgacggtgctggcgctgttgttcgacccggatgcgccactgcgccacgccacgcac
gtggatgacgacctggcgctggacgtgcttgcatga
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