Xanthomonas campestris pv. raphani: XCR_0231
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Entry
XCR_0231 CDS
T01872
Name
(GenBank) transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xcp03000
]
XCR_0231
Transcription factors [BR:
xcp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
XCR_0231
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AEL05161
UniProt:
G0CJC5
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All DBs
Position
266018..267322
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AA seq
434 aa
AA seq
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MSTPFEINLRHLYAMHVVAEAGSVSAAAPQVNLSQPALTQAIARLEQQLGVRLFDRHPGG
MAGTEATRLLAPRVARALAHLGRGLRVARRALRLPARPGLERRVSLGQLQALVAVDVAGS
YSLAAVRTGVSQPAIYRAVQTLADVVEVPLIVRRGKSVHATPVALRLLRQVRLALAELGA
GLDEVAALRSQHAGRVTVGVMPLARAVLLPRALARFARSHPGATVSVVEGPYPELLAQLR
EGGLDLLIGALREPLPVHDVVQDALFDDAAVIVARSGHPLAGQAYAFAQLLDYPWVVAAT
GTPLRARWERMFRDQQLEPPPPRIECGSVLVIRGLLLEDDWLTVMSRDQFLFEQRAGLLC
EIGLAVPQLRRQIGLTTRADWHPTRAQSAFVQTVRQVCADRALPADTAAGPFRHCAAASG
PLRLCAARSESGSP
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacacctttcgaaatcaacctgcgccacctgtatgccatgcatgtggtggccgaa
gcgggcagcgtcagcgccgccgcgccacaggtgaacctgtcgcagccggcgctcacccag
gccatcgcgcggctggaacagcaattgggcgtgcggttgttcgaccgccaccccggcggc
atggccggcaccgaggccacgcgcctgctggcaccgcgggtggcgcgcgcactggcgcat
ctggggcgcgggctgcgggtggcgcggcgcgcgctgcggctgccggcccgcccgggcctg
gagcggcgggtgtcgctggggcaactgcaggcactggtggcggtggacgtcgccggcagc
tattcgttggcggcggtgcgcaccggggtctcgcagccggccatctaccgcgcggtgcag
acgctggccgatgtggtcgaagtgccgttgatcgtgcgccgcggcaagagcgtgcacgcc
acgccggtggcgctgcggctgctgcggcaggtgcggctcgccttggcggagctgggcgcc
gggctggacgaggtggccgcgctgcgctcccagcacgccgggcgggtgactgtgggggtg
atgccgcttgcccgcgcggtattgctgccgcgggcgctggcgcgcttcgcacgcagccac
cccggtgccaccgtcagcgtggtggaagggccgtatccggagttgctggcgcagctgcgc
gagggcgggctagacctgttgatcggcgcgttgcgcgagccgttgcccgtgcacgacgtg
gtgcaggacgcgctattcgacgatgcggcggtgatcgtggcgcgcagcgggcatccgctg
gccgggcaggcctacgccttcgcgcaattgctggactacccatgggtggtggcggccacg
ggtacgccgctgcgcgcgcgctgggagcgcatgttccgcgaccagcagctggagccgccg
ccgccgcgcatcgaatgcgggtcggtgctggtcatccgcgggctgctgctggaagacgac
tggctgaccgtgatgtcgcgcgaccagttcctgttcgagcaacgcgccgggctgctgtgc
gagatcggcctggcggtgccgcagctgcgccggcagattggcctgaccacacgcgctgat
tggcaccccacccgcgcgcagtcggccttcgtgcagaccgtgcgccaggtgtgcgccgac
cgcgcgctgccggccgatactgcggccgggccattccggcattgcgcggcggcgtccggg
ccgttgcgtttatgcgcggcccggtcagaatcgggctccccttga
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