Xanthomonas campestris pv. raphani: XCR_0234
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Entry
XCR_0234 CDS
T01872
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp03420
Nucleotide excision repair
xcp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XCR_0234 (uvrD)
03430 Mismatch repair
XCR_0234 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcp03400
]
XCR_0234 (uvrD)
Enzymes [BR:
xcp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XCR_0234 (uvrD)
DNA repair and recombination proteins [BR:
xcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XCR_0234 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
XCR_0234 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
DUF6825
InPase
Motif
Other DBs
NCBI-ProteinID:
AEL05164
LinkDB
All DBs
Position
270738..272909
Genome browser
AA seq
723 aa
AA seq
DB search
MLDYLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIFAVTFTNK
AAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDDQLRLVKR
VVQSLELDETKYPPKQMSWWINEQKDEGRRPQHIQPEPNDDWTEVRRQVYAAYQERCDRS
GLLDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGETGHVF
VVGDDDQAIYGWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVIAHNPDRI
GKQLWTDSGDGDPIDLYAAYNEVDEARYVVERARQWVRDGGSYGEVAVLYRSNAQSRALE
EALIAEQLPYRVYGGMRFFERAEIKDALAYLRMLTNRSDDAAFERAVNTPTRGIGDRTLD
EVRRLARANALSLWEAAMLCTQENTLAARARNALATFLSLVGQLQAETGEMDLAERIDHV
LMRSGLREHWAKESRGGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVAFLAYASL
EAGEGQAQAGEEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEESGRLEEERRLAY
VGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRDLLHEVRPKVQVSRTASLGAAR
GGPVHGVVEAAPIKLGANVEHPKFGGGVVVDYEGAGAHARVQVQFDEVGAKWLVMAYANL
TVV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgattatttaaaccccgcccagcgcgaggccgtttccgcgccgccggggcattac
ctcgtgctggccggcgccggctccggcaagacgcgcgtgctgatccatcgcattgcctgg
ctcaacgaagtccagggcgtgcccaaccacggcatcttcgcggtgaccttcaccaacaag
gccgccggcgaaatgcgccaccgcaccgacctgcaactgcgcaacggcagccgcgggatg
tggatcggcaccttccatgggcttgcccatcgcctgctgcgcctgcactggcaggacgcg
cggctgccggaaggcttccaggtcatggacagcgacgaccagttgcggctggtcaagcgc
gtggtgcagtcgctggagctggacgagaccaagtatccgcccaagcagatgagctggtgg
atcaacgagcagaaggacgaaggccgccgcccgcagcacatccagcccgagccaaacgac
gactggaccgaggtgcgccggcaggtgtacgccgcctaccaggaacgctgcgaccgctcc
gggctgctggatttcgccgagctgctgctgcgcgcgcacgaattactgcgcgacaccccg
gccttgctggcgcactaccgcgcgcgcttccgcgaaattctggtggacgagttccaggac
accaacgccatccagtacgccttcgtgcgcgtgctggccggtgagaccggccacgtattt
gtggtgggcgacgacgaccaggccatctacggctggcgtggtgccaaggtcgagaacgtg
cagcgcttcctcaaggatttccccggtgcgcagacggtgcggctggagcagaactaccgg
tccagcgccaatattctgggcgcggccaatgcggtgatcgcgcataaccccgaccgcatc
ggcaagcagttgtggaccgattccggcgatggcgacccgatcgatctgtacgcggcctac
aacgaagtcgacgaggcccgctatgtagtcgagcgcgcgcgccagtgggtgcgcgatggc
ggcagctatggcgaagtggcggtgctctatcgcagcaatgcgcaatcgcgcgcgctggaa
gaagcactgattgccgaacaactgccgtaccgcgtgtatggcggcatgcgctttttcgaa
cgcgccgaaatcaaggacgcgctggcgtacctgcgcatgctcaccaaccgcagcgacgat
gcggcgttcgagcgcgcggtcaacacgcccacgcgtggcattggcgatcgcaccctggat
gaagtgcgccggctggcacgcgccaatgcgctgtcgctgtgggaagcggcaatgctgtgc
acgcaggaaaatactcttgcggcgcgtgcacgcaatgcgctggctacgttcctgagcctg
gtcggccagctgcaggccgaaaccggcgagatggacctggccgagcgcatcgaccatgtg
ctgatgcgctcgggcctgcgcgagcattgggccaaggaaagccgcggcgggctggattcg
gaatcgcgcaccgagaacctggacgaactggtctcggtggcctcgcgcttcacccgcccg
gacgatgaagacagccagggcatgaccgaactggtggccttcctcgcctacgcctcgctg
gaagccggcgaaggccaggcgcaggccggcgaagaaggcgtgcagctgatgacgctgcac
tcggccaaaggcctggaatttccgatcgtgttcctggtcgggctggaagatggtttgttc
cccagcgcacgctcgctggaagaaagcggccggctcgaagaagaacgccgcctggcttac
gtgggtatcacccgcgcgcgccagaaactggtgctgtgctacgccgaatcgcggcgcatt
cacggccaggacaactacaacgtgccgtcgcgctttctgcgcgagatcccgcgcgacctg
ctgcatgaagtgcggcccaaggtgcaggtctcgcgcaccgcctcgctgggcgcggcacgt
ggcggcccggtgcacggcgtggtcgaagccgcaccgatcaagctcggcgccaatgtcgaa
catccaaagttcggtggtggcgtggtcgtcgactacgaaggcgccggcgcgcatgcacgg
gtgcaggtgcaattcgatgaagtgggcgccaagtggctggtgatggcgtacgcgaatctg
acggtggtgtag
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