Xanthomonas campestris pv. raphani: XCR_0241
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Entry
XCR_0241 CDS
T01872
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp03030
DNA replication
xcp03410
Base excision repair
xcp03420
Nucleotide excision repair
xcp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XCR_0241 (polA)
03410 Base excision repair
XCR_0241 (polA)
03420 Nucleotide excision repair
XCR_0241 (polA)
03440 Homologous recombination
XCR_0241 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xcp03032
]
XCR_0241 (polA)
03400 DNA repair and recombination proteins [BR:
xcp03400
]
XCR_0241 (polA)
Enzymes [BR:
xcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XCR_0241 (polA)
DNA replication proteins [BR:
xcp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
XCR_0241 (polA)
DNA repair and recombination proteins [BR:
xcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
XCR_0241 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XCR_0241 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AEL05170
UniProt:
G0CJD4
LinkDB
All DBs
Position
276591..279374
Genome browser
AA seq
927 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKERPAYVAFVVDAPG
KTFRDDLYADYKANRPSMPDDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQGA
SDGLAVTISTGDKDFAQLVRPGVELVNTMSGSRMDSDEAVIAKFGVRPNQIVDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYDSLDGVIANADKIKGKIGENLRAALPRLPLNRELVTI
KTDVVLASGPRALDLREPNAEALAVLYARYGFTQALRELGGGAAEAGALTAPMAVARTEP
GRARGTGFVSAPAAAPVELDPALSAPGQYETILTQAQLDSWIARLRAAGQFAFDTETDSL
DALQANLIGLSVAAEPGQAAYLPFGHDFPGAPAQLDRTQALAQLAPLLTDPAVRKLGQHG
KYDLHVMRRHGIALAGYADDTLLESFVLNSGSARHDMDSLAKRYLGYDTVKYEDICGKGA
KQIKFAQVSLEDATRYAAEDADITLRLHQVLGKRLAAEPALESVYREIEMPLVGVLERIE
ANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQLQALLFDELKLPAVVK
TPKGQPSTNEEALEAIADQHELPRVILDYRSLAKLRSTYTDKLPEMIHPQSGRVHTSYHQ
AGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPAGRKLIACDYSQIELRIMAHLSGDP
GLVGAFESGADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLARQLGIGR
GEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGAER
AAINAPMQGTAADIIKRAMVSVDGWIADHAQRALMILQVHDELVFEADADFVDTLLAEVT
ARMSAAASLRVPLVVDSGVGDNWDEAH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgatcgacgggtccagttacctgtatcgcgcgttccacgcgctt
ccgccgctgaccaatgcccagggcgagcccaccggtgcgttgttcggcgtggtcaacatg
ctgcgcgccaccttgaaggaacgcccggcctatgtggcgttcgtggtggatgcgcccggc
aagacatttcgtgatgacttgtatgccgactacaaggccaaccgcccgtcgatgcccgac
gacttgcgtgcgcaggtgcagccgatgtgcgacatcgtgcatgcgctgggcatcgacatc
ctgcgcattgacggcgtggaagcggatgacgtgatcggcacgctcgcgctgcaaggcgcc
agcgacggcctggccgtcaccatctccaccggcgacaaggacttcgcgcagctggtgcgc
ccgggcgtggaactggtcaacaccatgagcggcagccgcatggattcggacgaagcggtg
atcgccaagttcggcgtgcgcccgaaccagatcgtcgacttgctggcgctgatgggcgac
accgtcgacaacgtgcccggcgtggaaaagtgcggccccaagaccgccgccaaatggctg
gccgaatacgactcgctcgacggcgtgatcgccaatgccgacaagatcaagggcaagatc
ggcgagaacctgcgcgccgccttgccgcggctgccgctcaatcgcgagctggtcaccatc
aagaccgacgtggtgctggccagtggcccgcgcgcgctggacctgcgcgagcccaacgcc
gaagcgctggcggtgctgtacgcgcgctacggcttcacccaggcgctgcgcgaactcggt
ggcggcgccgccgaggccggcgcgctgaccgcaccgatggcggtggcgcgcaccgagcct
ggccgtgcacgcggcaccggcttcgtgtcggcgccggctgccgccccggtggagctggac
ccggcactgtcggcgcccggccagtacgagaccatcctcacccaggcgcagctcgacagc
tggatcgcgcggctgcgcgcggccgggcagttcgccttcgataccgaaaccgacagcctg
gacgcgctgcaggccaacctgatcggcctcagcgtcgccgccgagcccggccaggccgcc
tacctgccattcggccatgacttccccggcgcaccagcccagctcgaccgcacgcaggcg
ctggcgcagctggcgccgctgctgaccgacccggcagtgcgcaagctcggccagcacggc
aagtacgacctgcacgtgatgcgccgccacggcatcgccctggccggctacgccgacgac
accctgctggagagcttcgtgctcaactccggcagtgcccgccacgacatggacagcctg
gccaaacgttaccttggctacgacaccgtcaagtacgaagacatctgcggcaagggcgcc
aagcagatcaagttcgcccaggtcagcctggaagacgccacccgctacgccgccgaagac
gccgacatcaccctgcgcctgcaccaggtgctgggcaagcgcctggccgctgagccggcg
ctggaaagtgtctaccgcgagatcgaaatgccgctggtgggcgtactggagcgtatcgag
gccaacggcgtgtgcgtggacgcagccgaactgcgccgccagagcgcggacctgtccaag
cgcatgctcgccgcccagcagaaggccaccgaactggccgggcgcaccttcaacctggac
tcgcccaagcagctgcaggcactgctgttcgacgagctcaagctccccgccgtggtcaag
acgcccaagggccagccgtccaccaacgaagaagccctggaagccatcgccgaccagcac
gaactgccgcgggtgatcctggactaccgcagcctggccaaactgcgcagcacctacacc
gacaagctgccggagatgatccacccgcagtccgggcgcgtgcacaccagctaccaccag
gccggcgcggccaccgggcggttgtcttcgtccgaccccaacctgcagaacatcccgatc
cgcaccgaagacggccgccgcatccgccgcgccttcgtcgccccggccggacgcaagctg
atcgcctgcgactactcgcagatcgagctgcgcatcatggcccacctgtccggcgacccc
ggcctggtcggcgcattcgaatccggcgccgacgtgcaccgtgccaccgccgccgaagtg
ttcggacgcaccatcgacacggtcagcggggatgagcgccgcgccgccaaggcgatcaac
ttcggcctgatgtatggcatgagtgcgttcggcctggcccgccagctcggcatcggccgt
ggcgaggcgcaggactacatcgcgctgtactttagccgttacccgggcgtgcgcgatttc
atggaaaccactcgccagcaggcccgcgacaagggctacgtggaaaccgtgttcggccgc
cggctgtatctggacttcatcaacgccggcagccagggccaacgtgccggcgccgagcgc
gcggccatcaacgcgccgatgcagggcactgccgccgacatcatcaagcgcgccatggtc
agcgtggatggctggatcgccgatcacgcgcagcgcgccctgatgatcctgcaggtgcac
gacgaactggtgttcgaggccgacgccgacttcgtcgacacgctgctggccgaggtcacc
gcgcgcatgtccgcggccgccagcctgcgcgtgccgctggtggtcgattcgggcgtgggc
gataactgggacgaggcgcattga
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