Xanthomonas campestris pv. raphani: XCR_0329
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Entry
XCR_0329 CDS
T01872
Name
(GenBank) tRNA-dihydrouridine synthase A
KO
K05539
tRNA-dihydrouridine synthase A [EC:1.-.-.-]
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xcp03016
]
XCR_0329
Transfer RNA biogenesis [BR:
xcp03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
XCR_0329
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Gene cluster
GFIT
Motif
Pfam:
Dus
HAAS
TetR_C_11
Motif
Other DBs
NCBI-ProteinID:
AEL05258
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All DBs
Position
372510..373610
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AA seq
366 aa
AA seq
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MHAALPQIQRLPCKLLILLRIPGRRLRGPSSMTLPPPAAYADSLRLSVAPMMDWTDRHCR
VFHRLLAPSARLYTEMVHANAVIHGDRQRLIGFDAVEHPLALQLGGSDPALLAQAAQIAQ
AWGYDEINLNCGCPSDRVQAGRFGACLMREPALVADCVAAMCAATALPVTVKCRLGVDDD
EDYAVFAGFIDQVVGAGAAMVVVHARNAWLKGLSPKENREVPPLRYDWAYRLKQERPALP
VVLNGGIASVEASLAHLQHTDGVMLGRAAYHDPYVLHQLEAALSGRPERARADLLQAYQP
YVQAQLDQGLALKHMTRHILGLFHGQPGGRVFRQVLSEGAHRPGAGWELVEQALQRTDDQ
ARRIAA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccgcgctgccgcagattcagcgcctgccgtgtaagctgttgatcctgctccgc
attccaggccgccggttgcgcggcccatcgtcgatgactctgccccctcccgctgcgtac
gccgattccctgcgcctgtccgtcgccccgatgatggactggaccgaccgtcattgtcgg
gtcttccaccggctgctggcgccgtcggcgcggctgtacacggaaatggtgcacgccaat
gcggtgatccatggcgatcgccagcgcctgatcggcttcgatgcggtcgagcacccgctg
gccctgcaactgggcggcagcgatcctgcgttgctcgcgcaggcggcgcagatcgcccag
gcgtggggttatgacgagatcaacctcaattgcggctgcccgtccgaccgggtgcaggcc
gggcgctttggcgcctgcctgatgcgcgagccggcgctggtggcggactgcgtcgcggcg
atgtgcgcggccaccgccctgccggttacggtcaagtgccgcctgggtgtggacgacgat
gaggactacgccgtgtttgccggcttcatcgaccaggtggtcggcgccggcgccgccatg
gtggtggtgcacgcgcgcaacgcctggctcaagggcctgtcgccgaaagagaaccgcgaa
gtcccgccgttacggtacgactgggcctaccgcctcaagcaggagcggccggccttgccg
gtggtgctcaatggcggcatcgccagcgtcgaggcctccctggcacatctgcagcacacc
gacggagtgatgctgggccgggccgcctatcacgacccgtacgtgctgcatcagctggag
gcggccttgtccgggcgccccgagcgcgcgcgcgcagacctgctgcaggcctaccagccc
tacgtgcaggcgcaactggatcaggggttggccctgaagcacatgacccggcacatcctc
ggcttgttccacgggcagcccggcggccgggtgttccgccaggtgctgagcgagggcgcc
caccgccccggcgcgggttgggagctggtggaacaggcgttacagcgcaccgacgatcag
gcgcggcgcattgctgcctga
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