Xanthomonas campestris pv. raphani: XCR_0408
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Entry
XCR_0408 CDS
T01872
Name
(GenBank) putative signal protein with EAL domain
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
XCR_0408
Enzymes [BR:
xcp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
XCR_0408
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
Motif
Other DBs
NCBI-ProteinID:
AEL05334
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All DBs
Position
complement(436728..438287)
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AA seq
519 aa
AA seq
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MKRHRIISVTVLLALLCAALPTGVSYYLAWRLALTREQAELSRLAELSIRRTDTAFDEAH
GALLSMAASTLPSCSPAHLAQMRALVLSSHHIVELGHFQQGQLRCTSWGTLDAAVPQTPA
DFTVARGIAVTTRLLPLASPQHPVMALHLGDYNVLINPSTLTDINVPPGLQLAIGTPAGQ
ILSSTGTAAEQLLQGQALAATSHAAPASEVLSGRARRGDWVAVVTEPAAYLRGPLAALRL
QLLPVGILVALLLVGAVVWVSRRRLSPLARLEIAVQRGEFVVHYQPIIALDSGDCVGAEA
LVRWQQPGGALVPPDDFIPLAEHSGLILPITDLVVAEVIRDLGPMLAADRSLHVAINVSA
GDIKSGRVQSVLADALAGTGVDSGQLWVEATERSLMDIDAARTTIMHLRGAGHTVSIDDF
GTGYSSLQYLQGLPLDALKIDKSFVDTIGTHSATSAVTSHIIEMAKTLQLRTIAEGVERQ
EQLDYLRAHGVDLAQGWLFSRALPAAGFIAYRNALRRTG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcggcaccgcatcatcagcgtcaccgtgctgcttgccctgctgtgtgcggcgctt
cccaccggcgtgtcgtattacctggcttggcggttggcgctcacgcgcgagcaggccgag
ttgagccggctggccgaattgtcgatccgccgcaccgacaccgccttcgacgaggcgcat
ggcgcgctgctgagcatggccgcatcgaccctgccctcctgttcgcccgcgcacctggcg
cagatgcgcgcgctggtgctgagcagccaccacatcgtcgaactcggccatttccagcaa
ggtcagctgcgctgcacctcgtggggcacgctggacgccgcagtgccacagacgcctgcg
gacttcacggtcgcgcgcgggatcgccgtgaccacgcgcctgcttccgctggccagcccg
cagcacccggtgatggccctgcacctgggcgactacaacgtcctgatcaacccctccacg
ctcaccgacatcaacgtcccacccggcctgcaattggcgatcggcacgccggccgggcag
atcctcagcagcaccggcaccgccgccgaacagttgctgcaggggcaggcgctggcggcc
acctcgcatgccgcgccggcctcggaagtactgtccgggcgggcgcggcgcggcgattgg
gtggccgtggtcaccgagccggccgcctatctgcgcgggccgctggcggccttgcgcctg
cagctgctgccagtcggcatcctggtggcgctgttgctggtgggtgcggtggtgtgggtg
tcacggcggcgcctgtccccgctggcgcggctggagatcgccgtgcagcgtggcgagttc
gtggtgcattaccaaccgatcatcgcgctggacagcggagactgcgtgggcgccgaggcc
ctggtgcgctggcagcagcccggcggcgcgctggtgccgccggatgacttcatcccgttg
gccgagcacagtgggttgatcctgccgatcaccgacctggtggtggccgaagtcatccgc
gacctcggcccgatgctggcggccgatcgctccctgcacgtggccatcaatgtctcggcc
ggcgatatcaagagcggccgcgtgcagagcgtgctggccgatgcattggccggcaccggc
gtggacagcgggcaactgtgggtggaagcgaccgagcgcagcctcatggatatcgatgcg
gcgcgcaccacgatcatgcatctgcgcggcgccggccacaccgtgtccatcgacgacttc
ggcaccggctattcgagcctgcaatacctgcaggggctgccgctggacgcgttaaagatc
gacaaatccttcgtggataccatcggtacgcactcggccaccagcgcggtgacctcgcac
atcatcgaaatggccaagaccctgcagttgcgcaccattgccgaaggcgtggagcggcag
gagcaactggattatctgcgcgcccacggcgtggacctggcacagggctggctgttctcg
cgcgccttgccggcggcggggttcattgcttatcgcaatgcgctgcggcggactggctga
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