Xanthomonas campestris pv. raphani: XCR_0536
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Entry
XCR_0536 CDS
T01872
Symbol
priA
Name
(GenBank) primosomal protein N
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XCR_0536 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcp03400
]
XCR_0536 (priA)
Enzymes [BR:
xcp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XCR_0536 (priA)
DNA repair and recombination proteins [BR:
xcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XCR_0536 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
ResIII
PriA_3primeBD
Helicase_C
Zn_ribbon_PriA
AAA_30
SH3_16
AAA_19
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
AEL05456
LinkDB
All DBs
Position
complement(564481..566586)
Genome browser
AA seq
701 aa
AA seq
DB search
MRVPFGPRELIGVVVERGQQPSAEGLRAALDWCDDTPLLVDELARSLHWLARYTHAPLGE
AQASALPGPLRRGEPLADTHAWAWQLTEAGRTGAGSLRAGSRPALLAALLLAGPLTEEPL
EQQLPQWREAARNLAKRGYAERVAVAADTLPARPGTGPQLNDEQQAATDAIRAGSGFATY
LLDGVTGSGKTEVYLQAIADCLAAGKQALVLVPEIGLTPQTLGRFRARLGVPVHALHSGL
SDGERARVWAAAWRGEAKLIVGTRSAVFTPLPNAGLIVIDEEHDGSYKQQDGIRYHARDF
ALVRGKALDVPVILGSATPSLESLHNAYSGRYRHLRLSRRAGDARPPRVRVLDVRKRPLK
DGLSPEVLAGIGATLARGEQVLVFKNRRGYAPVLLCHDCGWTAACQRCSTPLHQTPMTVH
AGGRRLQCHHCGARQPAPLACPACASLALQPQGIGTERLEERLVEAFPEAPVVRIDRSTT
QRRDALETQLARLGTDAGILVGTQILAKGHDLPRLTMVVVVGIDEGLFSADFRAAEKLAQ
QLIQVAGRAGRADRAGEVWLQTHHPEHPLLQTLVNGGYHAFADAELQQREAAGFPPFSHL
ALFRAEAKDVAAANQFLIAVRALVGEQTPAPSPALAPVECYGPMPAPMPRRAGFQRTQLL
LSAAQRSALHRVLDAQMPAIHALPQARRVRWSLDVDPIDLY
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgtgccgtttgggccgcgcgagctgatcggggtggtcgtcgagcgcggccagcag
ccgtcggccgaagggctgcgcgcggcgctggactggtgcgacgacacaccgctgctggtg
gatgagctggcccgttcgttgcactggcttgcccgctacacccatgccccgctcggcgag
gcccaggccagcgcgctgcccggcccgctgcgccggggcgagccattggccgacacccat
gcctgggcctggcaactcaccgaggccggccgcactggtgccggtagcctgcgcgccggt
agccgcccggccctgctggccgcgctgctgctggccggcccactcaccgaagagccgctc
gagcagcagctgccgcagtggcgcgaggctgcccgcaacctggccaagcgtggctacgcc
gagcgcgtggcggtggccgccgacacgctgccggcgcgcccgggcaccgggccgcagctc
aacgacgaacagcaggcggccaccgacgccatccgcgccggcagcggctttgccacctat
ctgctcgacggcgtcaccggcagcggcaagaccgaggtctacctgcaggcgatcgccgat
tgcctggccgccggcaagcaggcgctggtgctggtgccggaaatcggcctgaccccgcag
acgctgggccgcttccgcgcgcgcctgggcgtaccggtgcatgcgctgcattccgggctc
tccgacggcgagcgtgcgcgggtgtgggccgcggcctggcgtggcgaagccaagctgatc
gtcggcacgcgctcggcggtattcacgccgctgcccaacgccggcctgatcgtgatcgac
gaggaacacgacggcagctacaagcaacaggacggcatccgctaccacgcacgcgacttc
gccctggtgcgtggcaaggcgctggatgtgccggtgatcctgggcagcgcaacgccgtcg
ctggaaagcctgcacaacgcctacagcggccgctatcggcatctgcggctgtcgcgccgc
gccggcgatgcacggccgccgcgcgtgcgcgtgctcgacgtgcgcaagcgcccgctcaag
gacggcctgtcgccggaggtgctggccggcatcggcgccaccctggcgcgcggggaacag
gtgctggtgttcaagaaccggcgcggctatgcgccggtgctgctgtgccatgactgtggc
tggaccgccgcctgccaacgctgcagcacgccgctgcaccagaccccgatgaccgtgcac
gccggcggccgccgcctgcaatgccatcactgcggtgcgcgccaaccggcgccgctggcc
tgcccggcctgcgccagcctggcgttgcagccgcagggcatcggcaccgagcggctggag
gagcgcctggtcgaggccttcccggaagcgccggtggtgcgcatcgaccgcagcaccacc
cagcgccgcgacgcgctggaaacccagctcgcccgcctcggcaccgacgccggcatcctg
gtcggcacccagatcctggccaagggccacgacttgccccgcctgaccatggtggtggtg
gtcggcatcgacgaaggcctgttctccgccgacttccgcgccgccgagaagctggcccag
caactgatccaggtcgccggccgcgccggccgcgccgaccgcgccggcgaggtgtggtta
cagacccatcaccccgagcatccgttgctgcagaccctggtcaacggcggctaccacgcg
tttgccgatgccgaactgcagcagcgcgaagcggccggcttcccgcccttctcgcatctg
gccttgttccgtgccgaagccaaggatgtggccgcggccaatcagttcctgatcgccgtg
cgcgcgctggtcggcgagcagacaccagccccctcgccggccctcgcgccggtggaatgc
tacgggccgatgccggcgccgatgccacgccgcgccggtttccagcgcacccaactcctg
ctgtcggcagcgcaacgctctgcgctgcatcgagtgctggacgcgcagatgccggccatc
catgccttgccgcaagcgcgccgggtacgctggtcgctggatgtggacccgatcgatctg
tattga
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