Xanthomonas campestris pv. raphani: XCR_0542
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Entry
XCR_0542 CDS
T01872
Name
(GenBank) multidrug efflux protein
KO
K26939
MATE family, multidrug efflux pump
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xcp02000
]
XCR_0542
Transporters [BR:
xcp02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
XCR_0542
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
AEL05462
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All DBs
Position
569186..570562
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AA seq
458 aa
AA seq
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MSVPHSSPSATPRFAAEVRTTGLLALPLVLGHVSTGLIGFVDNVIAGHHGTATLAAVTIG
TSLLWLPMLVPIGTLISLTASVSQLVGAGREREIGPLFRQALWLSLGLGALMFGFLTAVP
PLLPTFGIAPDIVPGATDFLHAVRWGGPALTFYFCMRYLSEGMHWTLPTMLLGFGGLLVL
APLGYVLTYGKFGFAEHGAQGLGMASAITMWVQAIAFALYLWRSQRFAHLELFTHLEGPR
WRAIGDLLRTGLPIGITVLMEGGLFIVTALLIGRLGSTEAAAHQIAINVSQLCFMIPMGV
AEATTVRVGHAVGRGDPLGMRRAAWAGYAIVLGTQAVSASILLLGHDAIVGVYTNDAAVA
ALASVLLLFAATFQFPDGIQVLSAGALRGLKDTRVPMFLAMFSYWGLGMPLGAGLGLGLG
WGPQGMWIGLILGLTAAAILMGLRFRQTSRRLTADAAP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtccctcactcgtccccgtcggcaacgccacgctttgcagcggaagtgcgtacc
accggcctgctcgcgctgccgctggtgctcggccatgtctccaccggcctgatcggtttt
gtcgacaacgtgatcgccggccaccacggcaccgccacgctggcggcggtcaccatcggc
acctcgctgttgtggctgccgatgctggtgccgatcggcacgctgatctcgttgaccgct
tcggtctcgcaactggtcggtgccggccgcgagcgcgagatcggcccgttgttccgccag
gcgctgtggctgtcgctgggcctgggcgcactgatgttcggctttctcaccgcagtgccg
ccgttgctgcctacgttcgggatcgcgccggacatcgtgcccggcgccaccgacttcctg
cacgcggtgcgctggggcgggccggcgctgacgttctacttctgcatgcgctacctcagc
gaaggcatgcactggacgctgccgaccatgctgctgggctttggcgggctgctggtgctg
gcgccgctgggctacgtgctgacctacggcaagttcggcttcgccgagcatggtgcgcag
gggttgggcatggcctcggccatcaccatgtgggtgcaggcgattgcctttgcgctgtat
ctgtggcgctcgcagcgctttgcgcacctggagttgttcacccatcttgaaggcccgcgc
tggcgggcgatcggtgatctgttgcgcaccggcttgccgatcggcatcaccgtgttgatg
gaaggtgggctgttcatcgtcaccgcgttgttgatcgggcggctgggctccaccgaagcg
gccgcgcaccagatcgcgatcaacgtctcgcagctgtgtttcatgatccccatgggcgtg
gccgaagccaccaccgtgcgcgtcggccacgcggtcggccgtggcgatccgctgggcatg
cgccgcgcggcctgggccggctacgccatcgtgctgggcacgcaggcggtgtcggccagc
atcctgttgctcggtcacgacgccatcgtgggcgtgtataccaacgatgccgcagtagct
gcgctggcatcggtactgttgttgttcgcggccacgttccagtttcccgacggcatccag
gtgttgtcggccggcgccttgcgcgggctcaaggacacgcgcgtgccgatgttcctggcg
atgttttcgtactggggcttaggcatgccgctcggtgccgggctcggcctggggctgggc
tgggggccgcaaggcatgtggatcgggctgattctgggcctgaccgccgccgcgatcctg
atgggcttgcgcttccgccagaccagccggcggctgactgccgacgcggcaccctga
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