Xanthomonas campestris pv. raphani: XCR_0559
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Entry
XCR_0559 CDS
T01872
Symbol
sun
Name
(GenBank) ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xcp03009
]
XCR_0559 (sun)
Enzymes [BR:
xcp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
XCR_0559 (sun)
Ribosome biogenesis [BR:
xcp03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
XCR_0559 (sun)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_25
FtsJ
MTS
Methyltransf_11
Methyltransf_12
Methyltransf_24
Methyltransf_5
Methyltransf_33
Motif
Other DBs
NCBI-ProteinID:
AEL05479
LinkDB
All DBs
Position
586683..587993
Genome browser
AA seq
436 aa
AA seq
DB search
MAAETAAAGVASRLAAARILAAVFDQGRSLKAELTAALPGVSDPRDRALVEAICFAVLRR
RPAYDVALRQWLERPLPPRDAELKALLMAGFAQLDVLQLPAHAALSATVEACRALGRPRQ
AGMVNAVLRRAQREGFPAVADDAGWPSWLRKQLRADWGDQAEAIFVESARMAPMWLRVPR
ARVSPAEHVARLAEQGITAHTDPVLADAVRLDTAVPVSQLPGFAQGDVSVQDGSAQQVAD
ALALAPAARVLDACAAPGGKAAHLLERYPQLQLTALDVDARRLERVRQTVQRTAPDRTVR
LHAADAADTAAWWDGQPFDAVLLDAPCSATGVVRRQPDVLLHRRADDIDALCALQARLLD
ACWRTLRPGGQLLYTTCSLLKRENQTQIEAFLQRTADAQAQPLGAQFGHAAGAGRQRFPG
EQQCDGFFYALLLKAS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgaaaccgcggcagccggtgtcgcctcgcgcctggccgctgcccgcatcctg
gcggcggtgttcgaccaggggcgttcgctgaaagccgagctgaccgccgcgctgccgggc
gtcagtgatccgcgcgaccgtgctttggttgaagcgatctgttttgcggtactgcgccgc
cgcccggcctatgacgtggcattgcggcaatggctggagcgcccgctgccgccgcgcgat
gccgagctcaaggcgctgctgatggccggtttcgcgcaattggatgtcttgcagttgccc
gcacacgccgccttgtcggccactgtggaggcctgccgcgcgctgggccgcccgcgtcag
gccggcatggtcaacgcggtgctgcggcgcgcgcaacgcgagggcttccccgctgttgcc
gacgatgccggctggccgtcgtggctgcgcaagcaattgcgcgcggactggggcgaccag
gccgaagcgatctttgtggaaagtgcccgcatggcaccgatgtggctgcgtgtaccgcgc
gcccgtgtgagccctgccgagcatgttgcacggctggccgagcagggcatcaccgcgcac
accgacccggtgctggccgatgccgtgcgcctggacaccgcggtgccggtgagccaactg
cccggctttgcgcaaggcgatgtgtcggtgcaggacggctcggcccagcaggtggccgat
gcgctggccctggcacccgcagcgcgggtgctcgatgcctgcgcagcgcccggtggcaag
gcagcgcacttgctcgagcgttatccgcagctgcagctcactgcgctggatgtggatgcg
cgccgtctggagcgtgtgcggcagaccgtgcagcggaccgcgcccgatcgcacggtgcgc
ctgcacgccgccgatgcggccgacaccgccgcctggtgggacgggcagccgttcgatgcg
gtgctgctggatgcgccgtgttcggccaccggcgtggtgcgccgccagcccgatgtgctg
ttgcatcggcgggcagacgacatcgatgcgctgtgcgccctgcaggcccgtctgctggac
gcctgctggcgcaccttgcggccgggcgggcagttgctttacaccacctgctcgctgctc
aagcgcgaaaaccagacgcagattgaggccttcctccagcgcaccgccgatgcgcaggcg
cagccgctgggtgcgcaattcggccatgccgccggtgcgggacggcagcgctttcccggt
gaacagcagtgcgacggttttttctacgcgcttttgctaaaagcttcctga
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