Xanthomonas campestris pv. raphani: XCR_0739
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Entry
XCR_0739 CDS
T01872
Symbol
bioD
Name
(GenBank) dethiobiotin synthase
KO
K01935
dethiobiotin synthetase [EC:
6.3.3.3
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00780
Biotin metabolism
xcp01100
Metabolic pathways
xcp01240
Biosynthesis of cofactors
Module
xcp_M00123
Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
XCR_0739 (bioD)
Enzymes [BR:
xcp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.3 dethiobiotin synthase
XCR_0739 (bioD)
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Motif
Pfam:
AAA_26
CbiA
AAA_16
DUF1611
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AEL05656
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Position
764328..765002
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AA seq
224 aa
AA seq
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MQFPAFYVTGTDTGIGKTVASTALLHAVRARGHTAVGMKPVASGCVATPQGWHNEDALAL
QAASQPQPDYATLNPYALPAALAPELAAADVGVTLSLVPLQQSFAQLRAQAEVVVVEGVG
GWAAPLSAQLDQADLVRALQLPVVLVVGVRLGCINHARLTAAAIAADGLRCIGWIANEID
PQMVRIEDNIRMLGQRLAMPCWGRIPWRPNAQAEGLAQHIRLPE
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttcccgccttctacgtcactggcaccgataccggcatcggcaagaccgttgcc
agcacggccttgttgcatgcggtgcgcgcacgcggccacaccgcagtgggcatgaagccg
gtggccagtggctgcgtcgccaccccgcagggttggcacaacgaagacgcgctggcgctg
caagccgccagccagccgcagccggactacgccaccctcaatccatatgcgttgcctgcg
gcgctggctccggaactggctgccgccgatgtcggcgtgaccctgtcgctggtgccgctt
cagcagtcctttgcgcagctgcgcgcgcaggccgaggtggtggtggtggaaggggtcggc
ggttgggcggcgccgctgagtgcgcagctggatcaggccgatctggtgcgcgcattgcag
ctgccggtggtgctggtggtgggcgtgcggctgggctgcatcaaccatgcgcgcctgacc
gccgcggccatcgccgccgatggcctgcgctgcatcggctggatcgccaacgagatcgac
ccgcagatggtgcgcatcgaggacaacatccgcatgctcggccagcgcctggcgatgccg
tgctgggggcgcattccgtggcgccccaacgcccaggccgagggcctggcgcagcacatc
cgcctgccggagtga
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