KEGG   Xanthomonas campestris pv. raphani: XCR_0857
Entry
XCR_0857          CDS       T01872                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
xcp  Xanthomonas campestris pv. raphani
Pathway
xcp00740  Riboflavin metabolism
xcp01100  Metabolic pathways
xcp01110  Biosynthesis of secondary metabolites
xcp01240  Biosynthesis of cofactors
xcp02024  Quorum sensing
Module
xcp_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:xcp00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    XCR_0857 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    XCR_0857 (ribD)
Enzymes [BR:xcp01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     XCR_0857 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     XCR_0857 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: AEL05774
LinkDB
Position
896225..897319
AA seq 364 aa
MSVSADDHRWMAQALRVAERGGYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFAL
RAAGEQARGATAYVTLEPCAHYGRTPPCALALIAAGVTRVVAAMADPFPQVNGGGFTLLR
DAGIQVHSGVMEAQARALNQGFLSRVERGRPWVRVKLGASLDGRTAMASGESKWITGADA
RADVQRWRARAGVILTGAGTVLADDPSMTVRLGEDTPCVPPLRVVLDAGLRTLACANIRQ
GDAPTLYLHGADVTAPAFDGAEFAAMPLHAGRFDLAAVLASLAERGINEVHVEAGATLSG
ALLQAGLVDELLVYMAPVLLGETARPLLAGLGIDTMAQRHALQLLDVRHIGQDLRLRYAP
VATA
NT seq 1095 nt   +upstreamnt  +downstreamnt
gtgagcgtgagcgcagacgaccaccgctggatggcgcaggcactgcgcgtggccgaacgc
ggcggctacaccacccgccccaatccgatggtgggctgcgtgatcgtgcgcgatggcgtc
tgcgtgggcgaggggtttcatcagcgtgccggcggcccgcatgcagaagtgttcgcgctg
cgtgcggcgggcgaacaggcgcggggtgcaacggcgtatgtgaccctggagccctgcgcg
cattacgggcgcacgccgccgtgtgcgctggccttgatcgcggccggcgtgacccgcgtg
gtcgcggcgatggcggacccgtttccgcaggtcaatggtggtggcttcaccttgctgcgc
gatgcagggatccaggtgcacagcggggtgatggaagcgcaggcacgcgcgctcaaccag
ggctttctgtcgcgcgtggagcgtggccgcccatgggtgcgggtcaaactcggtgccagc
ctggatgggcgcaccgcgatggccagcggcgaatcgaagtggatcaccggcgccgatgcg
cgcgcggatgtgcagcgctggcgcgcacgtgccggcgtgatcctgaccggtgccggcacg
gtgctggccgatgacccatcgatgacggtgcggctgggcgaggacacgccgtgcgtgccg
ccgctgcgggtggtgctcgatgccggcttgcgcacgctggcgtgcgccaacattcgccag
ggcgatgcgcccaccttgtatctgcacggcgccgatgtcacggcgccggcgttcgacggc
gcggagtttgccgcgatgccgttgcatgcgggtcgcttcgatctggccgcggtgctggca
tcgctggccgagcgcggtatcaacgaggtgcacgtggaagccggcgccacgttgagcggc
gcactgctgcaggccggcctggtcgatgagctgttggtctacatggcgccggtgctgctg
ggtgagacggcgcggccgctgctggctgggctcggcatcgacaccatggcgcagcggcat
gcattgcagctgctcgatgtccgccacattggccaggatttgcgattgcgctatgcgccg
gttgctactgcgtaa

DBGET integrated database retrieval system