Xanthomonas campestris pv. raphani: XCR_1201
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Entry
XCR_1201 CDS
T01872
Name
(GenBank) DNA polymerase III subunit gamma-tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp03030
DNA replication
xcp03430
Mismatch repair
xcp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XCR_1201
03430 Mismatch repair
XCR_1201
03440 Homologous recombination
XCR_1201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xcp03032
]
XCR_1201
03400 DNA repair and recombination proteins [BR:
xcp03400
]
XCR_1201
Enzymes [BR:
xcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XCR_1201
DNA replication proteins [BR:
xcp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XCR_1201
DNA repair and recombination proteins [BR:
xcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XCR_1201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_14
ResIII
AAA_18
PIF1
AAA_7
AAA_30
Mg_chelatase
nSTAND3
AAA_19
TsaE
AAA_2
AAA_24
SKI
Motif
Other DBs
NCBI-ProteinID:
AEL06103
LinkDB
All DBs
Position
1216883..1218862
Genome browser
AA seq
659 aa
AA seq
DB search
MFAGFPMSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTI
ARIFAKSLNCETGTSADPCGTCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYM
PSRGKFKVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFN
LKRLDEDQIQGQMTRILAAEQIESDPSAIVQLSKAADGSLRDGLSLLDQAIAYAGGALRE
DVVRTMLGTVDRTQVGAMLQALSDGDGAQLLKVVAALAEFSPDWSSVLEALAEALHRIQV
QQLVPSVAFVGDGIDPTGFAAQLRPEVVQLWYQMALNGRRDLYLAPSPRAGFEMAVLRML
AFRPAAAVPAGSGDDGRGASAGGHTRGTATGVQAAPAAAAPAPAATSTKAADVSPAPVVS
APPVAAAPSPVVVLPTPAAEPAPSAPPARTDDTPPWAVDDAPVRAQAAPQGATAEVPAAV
PLMAPEAAMALPATVADDAAPAAMDAVVPVAPPSAPAPVTPPAATFDDGHIADAEQWLEL
VTRSGLNGPSRQLAANAAFIGHRDGVLRLALAPGFEYLNSERSIANLAQALAPELGNTPR
IVIETGSADVETLHERANRQKGERQSAAETAFMNDPNVQQLIQQQGARVVPDSIRPYDE
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgttcgctggtttcccgatgtcctatctcgttctcgcccgtaaatggcgcccgaagcgt
tttgccgaactcgttggccaggaacacgtggtccgcgcgctcagcaatgcgctcgacagt
ggccgcgtgcaccacgcgttcctgttcaccggcacccgcggcgtgggcaagaccaccatc
gcgcgcatcttcgccaaatcgctgaactgcgagaccggtaccagtgccgatccgtgcggc
acgtgcccggcctgtctggatatcgatgccgggcgttatatcgacctgctggagatcgac
gccgcgtccaacaccggcgtggacgatgtgcgcgaagtgattgaaaacgcgcagtacatg
ccctcgcgcggcaagttcaaggtctacctgatcgacgaagtgcacatgctttccaaggca
gcgttcaatgcgctgctgaagacgctggaagagccgccggagcacgtgaagttcctgctg
gccaccaccgacccgcaaaagctgccggtgacggtgctgtcgcgctgcctgcagttcaac
ctcaagcggctggacgaagaccagatccagggccagatgacccgcatcctggcggccgag
cagatcgagtcggacccgtcggcgatcgtgcagttgtccaaggcggccgatggctcgcta
cgcgacgggctgtccttgctcgaccaggccatcgcctatgccggcggcgcgctgcgcgaa
gacgtggtgcgcaccatgttgggcacggtcgaccgcacccaggtgggcgcgatgctgcag
gcgctgtccgatggggacggcgcgcagttgttgaaggtggttgccgcgttggcggaattc
tcgcccgactggagcagtgtgctggaggcgctggcggaggccttgcatcgcatccaggtg
cagcagctggtgccgtcggtggcgttcgtgggcgatggcatcgacccgaccggctttgcc
gcgcagctgcggccggaagtggtgcagctctggtaccagatggcgctcaacgggcgccgc
gatctgtacctggcgccgagtccgcgcgccgggtttgaaatggccgtgctgcgcatgctc
gccttccggccggctgccgcggtgccggccggcagcggcgacgatggacgtggcgccagc
gccggcggccacacgcgtggaacggccaccggcgtgcaggcggcgcctgcggccgccgca
cctgcaccggcggcgacatcgaccaaggcggccgacgtcagcccggcccccgtggtgtcc
gcgccccccgtcgctgccgcgccatcgccggtggtggtgttgcccacgcctgccgccgaa
cctgcgccgtcagcgccgcctgcgcgcacggatgacacaccgccgtgggcggtggacgac
gcaccggtgcgtgcacaggctgcaccgcaaggtgccactgccgaggtgcctgctgctgtg
ccgttaatggcgccggaagcggccatggcgctgcctgcgaccgtggccgacgacgcggcg
cctgcggccatggatgcggtggtgcctgtggccccgccgtctgcgcccgcgccggtgaca
ccgccggccgctacgttcgacgacggacacatcgccgatgccgagcaatggctggagctg
gtcacgcgcagcggtctgaatggcccctcgcgccagctcgctgccaatgcggccttcatc
ggccatcgcgacggcgtgctgcgcctggcgctggcgccgggctttgaatatctcaactcc
gaacgttccatcgccaatcttgcgcaggcgctggcgccggagttgggcaacacgccgcgc
atcgtgatcgagaccggcagcgccgatgtcgagaccctgcacgagcgtgccaatcgccag
aaaggcgagcgccagagtgcggccgaaaccgccttcatgaatgacccgaatgtgcagcag
ctgattcagcagcagggcgcgcgggttgttcccgattccatccgcccttacgacgagtaa
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