Xanthomonas campestris pv. raphani: XCR_1229
Help
Entry
XCR_1229 CDS
T01872
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xcp03000
]
XCR_1229 (prpR)
Transcription factors [BR:
xcp03000
]
Prokaryotic type
Helix-turn-helix
Other families
XCR_1229 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
HTH_23
AAA
AAA_7
AAA_2
HTH_17
HTH_Tnp_ISL3
HTH_29
HTH_50
nSTAND3
ATPase
HTH_30
HTH_31
Xre-like-HTH
HTH_28
YdaS_toxin
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
AEL06130
LinkDB
All DBs
Position
complement(1241628..1243184)
Genome browser
AA seq
518 aa
AA seq
DB search
MIWTVSVSRLTGLLADVIPEFDQRARIEQINLGFADAVEVIGQRLRRERCDVLVAGGSNA
AYLRSRLPLPLAPIQATGFDLMEALARARRIAPRIGVVTHATDVPSFQPFQDSFALDIAH
RRFVTAEDARDCIADLRASGIQVIVGTGMAIDFAEQAGLPGVLLYSADSVRLALDQAIAL
ATAPSSAAPALRNATRRTRNQPAALLGEDAAMVQVRALVQLYAPHASTVLISGETGTGKE
LVARQLHAGSRRRGRFVAINCGAITESLLEAELFGYSDGAFTGARRGGHTGLIEAAQDGT
LFLDEIGELPLPLQTRLLRVLEEREVLRVGATVPVPVDVRVVAASLQPLQTLVEQGRFRR
DLFYRLAALRIDLPPLRNRPDDIALLLTHYAQHGSETALPLSPAALQRLQQHAWPGNVRE
LRNLVERLCIHWKAQAQGQVSLAQLEAWAPELADASTPAGYDSTSADAASSRAHLTATLV
CAALERAQGNRAAAAKALGVSRTTLWRWMQAQGLTFSQ
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
gtgatctggacggtcagcgtgtcgcgcctgaccggcctgctggccgatgtcattcccgag
ttcgaccagcgcgcgcgtatcgagcagatcaacctcggctttgccgacgcggtcgaggtc
atcggccaacgcctgcgccgcgaacgctgcgacgtgttggtagccggcggctccaacgcc
gcctatctgcgcagccggctgccactgccgctggcgccgatccaggccaccggcttcgac
ctgatggaagccctggcgcgcgcgcgacgcatcgcaccgcgcatcggcgtggtcacccat
gccaccgacgtgccgtcatttcagccgttccaggacagcttcgcgctggacatcgcccac
cgccgcttcgtcactgccgaggatgcccgcgactgcatcgccgacctgcgtgccagcggc
atccaggtgatcgtcgggaccggcatggcgatcgacttcgccgaacaggccggcctgccc
ggcgtgttgttgtactcggccgactcggtccgcctggcgctcgaccaggcaatcgccctg
gccaccgcgcccagcagcgcagcccccgctctacgcaatgccacacgccgcacgcgcaac
caacctgccgcactgctcggcgaagacgccgccatggtgcaggtgcgtgcactggtgcag
ctgtacgcgccgcacgccagcaccgtgttgatcagcggagagaccggcaccggcaaggaa
ctggttgcgcgccagttgcacgccggcagccgccgccggggccggttcgtggcgatcaac
tgcggcgcgatcaccgagtcgctgctggaagcggaactgttcggctacagcgatggcgcc
ttcaccggcgcgcggcgcggcggccataccgggctgatcgaagccgcgcaggacggcacc
ctgtttctggatgaaatcggcgaactcccattgccgctgcagacccgcctgctgcgtgtc
ctggaagaacgcgaagtgctgcgcgttggcgccaccgtgccggtaccggtcgatgtgcgc
gtggtggcggccagcctgcagccgctgcagacactcgtcgagcagggccgcttccgccgc
gacctgttttatcgcctggccgcgttgcgcatcgacctgccgccgctgcggaatcgcccc
gacgacatcgccttgttactcacgcactacgcgcaacacggcagcgagacggcattgcca
ctctcgcccgctgcgctgcagcgactgcaacagcacgcctggcccggcaacgtgcgtgag
ctacgtaacctggtcgagcgtctgtgcattcattggaaggcgcaagcacagggccaggtg
agtctggcccagctcgaggcctgggctcctgagctggccgatgccagcacgccagcgggc
tacgattccacatccgccgacgcagccagctcgcgcgcgcacctcaccgcgacattggta
tgtgcggcactggaacgtgcgcagggcaaccgcgcggctgcggccaaagcgctgggcgtc
tcgcgcaccaccctctggcgctggatgcaggcacaggggcttactttctcgcagtga
DBGET
integrated database retrieval system
