Xanthomonas campestris pv. raphani: XCR_1527
Help
Entry
XCR_1527 CDS
T01872
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
XCR_1527 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xcp03019
]
XCR_1527 (rnc)
03009 Ribosome biogenesis [BR:
xcp03009
]
XCR_1527 (rnc)
03036 Chromosome and associated proteins [BR:
xcp03036
]
XCR_1527 (rnc)
Enzymes [BR:
xcp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
XCR_1527 (rnc)
Messenger RNA biogenesis [BR:
xcp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XCR_1527 (rnc)
Ribosome biogenesis [BR:
xcp03009
]
Eukaryotic type
90S particles
RNase
XCR_1527 (rnc)
Prokaryotic type
rRNA processing factors
XCR_1527 (rnc)
Chromosome and associated proteins [BR:
xcp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
XCR_1527 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
AEL06426
LinkDB
All DBs
Position
1561695..1562378
Genome browser
AA seq
227 aa
AA seq
DB search
MVSNRTFQRGDPIGHAFADPGLLAQALRHRSAGTPHNERLEFLGDGIVNLLIAEALYQRW
PKADEGALTRARAELVREGALAVIGRTLNLGERLTLGPGELKSGGHRRDSILADAVEAIV
AAIYLDCGFERCRAVVLPWFEPSLAALPVGKAEKDPKTRLQEWLQARQLPLPQYALISES
GDEHAKQFHVACILEQPAARAEGQGTSRRLAEQQAAATVIAQLDSNT
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtggtgtcgaatagaactttccagcgcggtgatccgatcggacatgcgtttgccgatccg
ggtctgctcgcccaggcgctgcgtcatcgcagcgccgggacgccgcataacgagcgtctg
gaattcctgggcgatggcatcgtcaatctgctgatcgccgaggcgttgtatcagcgctgg
cccaaggccgatgaaggcgccttgacccgtgcgcgcgccgagctggtgcgcgagggcgcg
ctggccgtcattgggcgcaccctcaacctgggcgagcgcttgacgctgggcccgggcgaa
ttgaaatccggcgggcatcgccgcgattcgatcctggccgacgcggtcgaagcgatcgtc
gcggcgatctatctggactgcgggttcgagcgttgccgcgcggtggtgctgccctggttc
gaaccgtcgctggcggcgttgccggtcggcaaggccgagaaagatcccaagacccggctg
caggaatggctgcaggcccggcaattgccattgccgcagtacgccctgatcagcgaaagc
ggcgacgaacacgccaaacagttccatgtcgcctgcatccttgagcagccagccgcccgc
gccgaggggcagggcacgtctcgtcggcttgccgagcaacaggccgcagccaccgtcatc
gcacaactggattcgaacacgtga
DBGET
integrated database retrieval system
