Xanthomonas campestris pv. raphani: XCR_1707
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Entry
XCR_1707 CDS
T01872
Name
(GenBank) photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcp03400
]
XCR_1707
Enzymes [BR:
xcp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
XCR_1707
DNA repair and recombination proteins [BR:
xcp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
XCR_1707
Prokaryotic type
XCR_1707
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CUB_M02D8_5_4th
Motif
Other DBs
NCBI-ProteinID:
AEL06605
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Position
1740869..1742287
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AA seq
472 aa
AA seq
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MSYAIVWFRRDLRLEDNPALRAALDAGHDPIPLYIDAPHEEGQWAPGAASRAWRHRSLAA
LDASLRARGSALLIRQGDSAQVLDAVIAQTEAVAVYWNRKYEPATQPRDAQIKRSLRERG
LEVQSCNAALLFEPWTLATQQGGPYKVFTPFWRNALTQLRLPDAMPAPRSLPPLPASLDG
VHVDALNLVPAPAWDRGFWEHWQPGEAGAHEMLEIFVDGALSGYRENRDRPDRVGTSQLS
PHLHFGEIAPWRIASTLEAQRTARNGAEIDGYIRQLGWRDFAYHLLHHFPDTTTQNLNPR
FAGFDWATVDPVTLDAWQRGRTGIPIVDAGLRQLWHTGWMHNRVRMIVASLLCKHLRVHW
LEGARWFWDTLVDADLANNTMGWQWVAGTGADAAPYFRVFNPVTQAEKFDPQATYITRWI
PELAALRVKERFAPWLHPLSLARLAPTYPRAPIIGLAEGRDAALAAYAGTRG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgccatcgtctggttccgtcgcgatctgcgtctggaggataaccccgccttg
cgcgccgcgctcgatgccgggcacgacccgattccgctctacatcgatgccccgcacgaa
gaaggtcaatgggcgccgggcgcggcatcgcgtgcgtggcggcatcgcagtctcgccgca
ctggatgcctccttgcgcgcgcgcggcagcgcgttgctgattcgccagggcgacagcgcg
caggtgctggacgcagtgatcgcgcagaccgaagcggtggcggtgtactggaaccgcaaa
tacgagccggccacccagccacgcgatgcgcagatcaagcgcagcctgcgtgagcgtggg
ctggaggtgcaaagctgcaacgccgcgctgttgttcgaaccatggaccctggccacccag
cagggcgggccgtacaaggtgtttacgccgttctggcggaatgcactcactcagctgcgc
ttgcccgatgccatgcccgcgccgcgcagtctgccgccgttgcccgcgtcgctggacggt
gtgcacgtcgatgcgctgaacctggtgcccgcgccggcatgggaccggggtttctgggaa
cactggcagccgggcgaagccggtgcgcacgagatgctggagatctttgtcgacggcgcg
ctgtcgggttaccgcgaaaaccgcgaccgtcccgaccgcgttggcacgtcgcagttgtcg
ccgcatctgcatttcggcgagatcgcgccctggcgcattgcaagcaccttggaggcgcag
cgcaccgcacgcaatggcgcggaaatcgacggctatattcgccagttgggatggcgcgat
tttgcgtaccacctgctgcatcacttcccggacaccaccacgcaaaacctcaacccgcgc
ttcgccggcttcgactgggccacggtggatccggtcacgctggacgcatggcagcgcggg
cgcaccggcatcccgatcgtcgatgcggggctgcggcagctgtggcacaccggctggatg
cacaaccgcgtgcgcatgatcgtggcgagcctgttgtgcaagcatctgcgcgtgcattgg
ctggagggcgcgcgctggttctgggacaccttggtggatgcggacctggccaacaacacg
atgggctggcagtgggtggccggcactggcgccgatgccgcgccgtatttccgcgtgttc
aatccggtgacgcaggccgagaaattcgacccgcaagccacttacatcacgcgctggatt
cccgagctggcggcattgcgggtgaaagagcgctttgcaccgtggctgcatccgttatcg
ctggcgcggctggcaccgacctatccgcgcgcgccgatcatcggcctggccgaagggcgc
gatgccgcgttggcggcctacgcaggcacgcgcggctaa
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