Xanthomonas campestris pv. raphani: XCR_1853
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Entry
XCR_1853 CDS
T01872
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xcp03032
]
XCR_1853 (gyrA)
03400 DNA repair and recombination proteins [BR:
xcp03400
]
XCR_1853 (gyrA)
Enzymes [BR:
xcp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
XCR_1853 (gyrA)
DNA replication proteins [BR:
xcp03032
]
Prokaryotic type
DNA Topoisomerases
XCR_1853 (gyrA)
DNA repair and recombination proteins [BR:
xcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
XCR_1853 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AEL06749
LinkDB
All DBs
Position
1886457..1889156
Genome browser
AA seq
899 aa
AA seq
DB search
MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMNELGAHSN
KAYFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYLMVDGQGNFGSVDGDSAAAM
RYTESRMSRLAHELMADIEKETVDFQPNYDEKELEPTVMPTRFPSLLVNGSAGIAVGMAT
NIPPHNLTEAINACIALIDTPELDIEGLMEYIPGPDFPTAGIINGTAGIAAGYRTGRGRV
RIRAKADVEVADNGREAIVVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDGM
RIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLMNLKQMLEAFIRHRREV
VTRRTIFELRKARARAHVLEGLTVALANIDEMIELIKTSANPQEARERMLAKTWEPGLVG
ALLGAAGAEASKPEDLAPGVGLSNGFYQLSEVQASQILEMRLHRLTGLEQEKLTDEYKQL
LEVIQGLIRILENPDVLLQVIRDELINIREEYGDARRTEIRHSEEDLDILDLIAPEDVVV
TLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFW
LPVHQLPEAGSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFFATRNGTVKKTPLS
EFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGV
RGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADNGDVAYILT
ATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVLLISDGGTLVR
TRGSEISRVGRNTQGVTLIRLSKGEKLQAVERLDASLEEPEDVVDEAVAITSDAPPAEG
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaccgccaaggaaatcatccaggtcaacctggaagacgagatgcgcaagagc
tacctcgattacgcgatgagcgtgatcgtggggcgcgcactccccgatgcgcgcgacggc
ctcaaacccgtgcatcgccgtgtgctgttcgcgatgaacgagttgggcgcgcacagcaac
aaggcctacttcaagtcggcacgtatcgtcggcgacgtcatcggtaagtaccacccgcac
ggcgaccagtcggtctacgacacgctggtgcgcatggcgcagccgttctcgctgcgctac
ctgatggtggacggccagggtaacttcggttcggtcgacggcgactctgccgcggcgatg
cgttacaccgagtcgcgcatgtcgcggctggcgcatgagctgatggccgacatcgaaaag
gaaaccgtcgatttccagcccaattacgatgaaaaggaactcgagccgacggtcatgccg
acccggttcccgagcctgctcgtcaacgggtcggccggtatcgcggtgggtatggccacc
aatatcccgccgcacaatctgaccgaagcgatcaacgcgtgcatcgcgctgatcgatacg
ccggagctggatatcgaagggctgatggagtacatcccgggcccggatttccccactgcc
ggcatcatcaacggcaccgccggcattgccgccggctaccgcaccggccgtggccgggtg
cgcatccgtgccaaggccgacgtggaagtggccgacaacggccgcgaagcgattgtggtc
accgagattccgtaccaggtcaacaaggcacggctgatcgaaaagatcgccgagctggtg
aaggaaaagaagctcgagggcatcagcgaactgcgcgatgagtccgacaaggacggcatg
cgcatctacatcgaaatcaagcgcggcgagtcggccgaggttgtgctcaacaacctgtac
cagcagacccagatggagtcggtgttcggcatcaacatggtggcgctggtcgatggccgc
ccgcagttgatgaacctcaagcagatgctggaggcgttcatccgccaccggcgcgaggtg
gtcacccgccgcaccattttcgaactgcgcaaggcacgcgcacgtgcgcatgtgctggaa
ggtctcaccgtcgcgttggccaacatcgacgagatgattgagctgatcaagacctcggcc
aatccgcaggaagcgcgcgagcgcatgctggccaagacctgggaaccgggcctggtgggc
gcgctgctcggcgctgccggtgccgaggcgtccaagccggaagatctggcgccgggcgtg
ggcctgtccaatggcttctaccagctcagcgaagtgcaggcctcgcagattctggaaatg
cgtctgcatcgcctgaccgggttggagcaggaaaagctcaccgacgaatacaagcagttg
ctcgaagtcatccagggcctgatccgcatcctggaaaaccccgacgtgctgttgcaggtg
atccgcgacgagctgatcaacatccgcgaagagtatggcgatgcgcgccgcaccgaaatc
cgtcacagcgaagaagacctggacatcctggatctgatcgccccggaagacgtggtggtg
acgctgtcgcacgcgggctatgccaagcgccaaccggtgagcgcgtatcgcgcgcaacgc
cgcggtggccgtggccgttcggcggcgtcgaccaaggaagaagatttcatcgatcagctg
tggctggtcaacacgcacgacacgctgttgaccttcaccagcagcggcaaggtgttctgg
ctgccggtgcatcagttgccggaggccggctccaatgcacgcggtcgcccgatcatcaac
tggattccgctggaatcgggcgagcgtgtgcaggcggtgctgccggtgcgcgaatacgcc
gacaaccgctacgtgttcttcgccacccgcaacggcacggtcaagaagaccccgctgagc
gaattcgcgttccgtctggcgcgcggcaagatcgccatcaatctcgatgaaggcgatgcg
ctggtgggtgtggcgctgaccgatggcgaccgcgacgtgctgctgtttgcttccaacggc
aagaccgtgcgctttggcgagtcgaccgtgcgctcgatgggccgtaccgccaccggcgtg
cgcggtatccgtctggccaagggcgaggaggtggtcagcctgatcgtttccgagcgtgcc
ggcggagtggaagacgaggtcgaggacgagagtgccgaggaggtcgtggagaccaccgac
ggcgccgagccggcagtgatcgatgtggccgacaacggtgatgtggcctacatcctcacc
gccaccgagaacgggtatggcaagcgcacgccgctggccgaatacccgcgcaaggggcgc
ggcacgcaaggcgtgatcggtattcagaccaccgagcgcaacggcaagttggtgcgtgcg
gtgctgctgggttccaccgatgaagtgctgctgatttccgatggtggcaccttggtgcgc
acgcgtggttcggagatttcgcgcgtgggccgcaacacccagggcgtgacgctgatccgg
ctgtccaagggcgagaaactgcaggcggtcgaacgcctggatgcctcgctggaagagccc
gaggatgtggtggacgaggcggttgcaatcaccagcgatgcgccgcctgccgagggctga
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