Xanthomonas campestris pv. raphani: XCR_1996
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Entry
XCR_1996 CDS
T01872
Name
(GenBank) expressed protein
KO
K15923
alpha-L-fucosidase 2 [EC:
3.2.1.51
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
XCR_1996
Enzymes [BR:
xcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
XCR_1996
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_95_cat
Glyco_hyd_65N_2
Glyco_hydro_95_C
Motif
Other DBs
NCBI-ProteinID:
AEL06885
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Position
2039316..2041610
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AA seq
764 aa
AA seq
DB search
MSQAAGIAPLPAVAPDDALHLWYREPANEWVQALPVGNGRLGAMVWGGIAHERLQLNEDT
LYAGGPYDATNPQALAALPQVRALIFAGRYAEAEQLADAKLLSRPLKQMPYQPLGDLLLD
FDRADGISEYRRQLDLDTAVATTTFRSGGAVQRREVFVSAQSQCIVVRLSCDRPGGISLR
VGIDSPQSGEVTVEQGSLLFSGRNGSFAGIDGKLRFALRVLPQVKGGSVTAVRDRLRIQG
ADEVVLLLTAATSYQRFDAVEGDPLALTAASLQKAGKLSYAALLRAHLADHQRLFRRVAI
DLGSSEAATLPTDERVQRFAEGNDPALAALYHQYGRYLLICSSRPGTQPANLQGIWNDLM
QPPWESKYTININTEMNYWPSEANALHECVEPLEAMLFDLARTGAHTARAMYDAPGWVVH
NNTDLWRQAGPIDGAQWSLWPMGGVWLLQQLWDRWDYGRDRAYLAKIYPLFKGAAEFFVA
TLVRDPGTGAMVTNPSMSPENQHPFGAAVCAGPTMDAQLLRDLFAQCIAMSKLLDVDAAL
AQQLATLREQLPPNRIGKAGQLQEWQQDWDMQAPEIHHRHVSHLYALHPSSQINLRDTPE
LAAAARRSLEIRGDNATGWGIGWRLNLWARLADGEHAYRILQLLLSPERTYPNLFDAHPP
FQIDGNFGGTAGITEMLLQSWGGSVFLLPALPKAWPRGSVRGLRVRGGASVDLEWDAGRL
QQARVHSDRGGRYQLSYAGQTLDLQLGAGRTQQVGLNNNRLVKQ
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgcaggcagccggcatcgcgccattgcctgcggtcgccccggacgatgccttgcac
ctgtggtatcgcgagccggccaatgaatgggtgcaggccttgccggtcggcaacggccgg
ctgggcgcgatggtgtggggcggcatcgcccacgagcgtctgcaactcaacgaagacacg
ctgtatgccggtggcccgtacgacgccaccaatccgcaggcgctggcggcgttgccgcag
gtgcgcgcgctgatctttgccggccgctatgcagaggccgagcagctggccgatgccaag
ctgttgtcgcgcccgctcaagcagatgccataccagccgttgggcgatctgttgctggat
ttcgaccgtgccgacggcatcagtgagtaccgtcgtcagctcgatctggataccgcagtg
gccaccaccacgttccgctccggcggcgcggtgcaacgacgcgaggtgttcgtgtcggcg
cagtcgcagtgcatcgtggtgcgtctgtcctgcgatcggccgggtggtatttcattgcgg
gtgggcatcgatagcccgcagagcggcgaggtcacggtagagcagggcagcctgctgttc
agtggccgcaatggcagcttcgccggcatcgacggcaagctgcgctttgcattgcgcgtg
ctgccccaggtcaagggtggcagcgtcaccgcggtgcgcgaccgtctgcgtatccagggt
gccgatgaagtggtgttgctgctgaccgcggctaccagttaccaacgtttcgatgcggtg
gaaggcgacccgctcgcgctcaccgcggcaagcctgcaaaaagccggcaagctcagctac
gccgcgttgttgcgcgcgcatctggccgatcatcaacgcctgttccggcgcgtagcgatc
gacctgggtagcagcgaagcggccacgcttcccaccgacgagcgcgtgcagcgctttgcc
gagggcaacgacccggcactggcagcgctctatcaccagtacgggcgctatctgctgatc
tgcagctcgcgacccggcactcaaccggccaacctgcagggcatctggaatgacctgatg
cagccgccgtgggagagcaagtacaccatcaacatcaacaccgagatgaactactggccc
agcgaagccaatgcactgcacgagtgcgtggaaccgctggaagccatgctgttcgatctc
gcccgcaccggtgcacacaccgcccgtgcgatgtacgacgcacccggctgggtggtccac
aacaacaccgatctgtggcgccaggccgggccgatcgacggtgcgcagtggagcctgtgg
ccgatgggcggggtgtggttgctgcagcagttgtgggaccgctgggactacggccgcgac
cgtgcgtatctggccaagatctaccccttgttcaagggtgcggcggagttcttcgtcgcc
accctggtgcgcgaccccggcaccggcgcgatggtgaccaatccatcgatgtcgccggaa
aaccagcatccgttcggggcggcggtctgcgccggcccgaccatggatgcgcagctattg
cgcgacctgttcgcgcagtgcatcgcgatgagcaagttgcttgacgtcgatgccgcgctg
gcacagcagctggccacgctgcgcgagcaattgccgcccaaccgcatcggcaaggcgggg
cagttgcaggagtggcagcaggactgggacatgcaggcgccggagatccatcaccgccac
gtctcgcatctgtatgccttgcatccttccagccagatcaacctgcgcgacacgcccgag
ttggcggctgccgcgcgacgttcgctggagattcgcggcgacaacgccaccggctggggc
atcggctggcgtctgaacctgtgggcgcggctggccgacggcgagcatgcgtaccgcatc
ctgcaactgctgctttcgcccgagcgcacctatccgaacctgttcgacgcacatccgccg
ttccagatcgatggcaacttcggcggcaccgccggcattaccgagatgctgctgcaaagc
tggggtggcagtgtgttcctgctgccggccttgcccaaggcctggccgcgcggcagcgtg
cgcggcctgcgtgtgcgcggcggcgccagcgtggatctggaatgggatgcaggtcgcttg
cagcaagcccgtgtgcacagcgatcgtggcgggcgctatcaactgtcctatgcagggcag
accctggacctgcaactgggcgccgggcgcacccagcaggtgggcctcaacaacaaccga
ttggtgaagcaatga
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