Xanthomonas campestris pv. raphani: XCR_2044
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Entry
XCR_2044 CDS
T01872
Name
(GenBank) filamentous hemagglutinin
KO
K15125
filamentous hemagglutinin
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xcp00536
]
XCR_2044
Glycosaminoglycan binding proteins [BR:
xcp00536
]
Heparan sulfate / Heparin
Microbial pathogens
XCR_2044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
PT-VENN
RodZ_C
Motif
Other DBs
NCBI-ProteinID:
AEL06931
LinkDB
All DBs
Position
complement(2101400..2107060)
Genome browser
AA seq
1886 aa
AA seq
DB search
MIAGADVSITAGNLLNQGRISGTGVVSLEARNDLLNQGQIQGRDVALVAGNNLVSEASKA
INGVGILSGITASNTLQLFAGNDMTLSGTRVQADGSAALIAGNNLSLTPSALRNDNGLLR
GGDAVSVITGKDLIVSAGNDLQLHGVTIKAGGSAALQAGNNLSLTPTTGLDGKVATRTNI
STGDSLQLTAGNDLTIREAEVTAGGDLIAAAGNNLNVESVLNETETNSYKSRNGKTRVTT
TTTTQSIDQQALTAGGNLILSAGNDVNLVAAKLDAGKGLGISAGNDINASTLTTVDTSNT
LETRKRFKQTTATRDETVYGTEFSAGGNLAMQAGNDITLTAATAASKNGAISLAAGNDVN
LLAASEQHDAVQDMTKKKKGTFSSKTTTTHDEWQDNFAIGTALSGESVNISAGNDVAVVG
STVLGNGDVRLAAGNNVTIESAQDTSSEAHSFSQKRSGLTGGIGGGVASIGYSKARNNSE
NSSKSVTQVASSVGSTDGNLVVSAGNQLTIAASDIGAGKDLTLAAKDIALLARQDTVESQ
SSQSSKSSGFSMGVTYDPGASYRSARDSTTKNMVDTGSTISKISRDAEGAAAGTMAAITP
VVIQASSHRSNASQNESTSDARVSQLAAGGNLTLLASDGSITSQGAQLSAEGNGLLLASK
DIVFDVAHNTQSSGNASNGKCWGFNNAAGLPYGNYNQQGTGNGQTDTITGTQLSVGGNAS
LTTTQGDITLTASNIAAQGNVSLRAAGDLTIQSGQDILGNANQSTSKGIGTVVISDTERF
AGYNKKNHTDDNAQVAQVASNVGSLGGNVSLTAGGAYTQSASNVVAAKDVDITAASIQLL
TANQSSSASQQDDDLKIGAFARIKSPLIDLINNVDDARKSDGRLGAMQGMAAAANAYQSA
SAISSMAGGAGSGSLLSVEAGVGFATSESSFNSASQLSQGSTITGGGNVSLKTTEGDLRI
VQGNLKAGDTLSLDSARDLVLEAGNSSNTEQSKGSNAGFEVGVGASVGAQTGVYAYVQAS
AGSHKSNVDGSTWQNTQLAGQKIVLTSEGDTTLRGAVVKGDRIDAQIGGDLTIESLQDKL
DIQSKESSVGGRVQVSAGTAWDASGYASGAQGNGNYLGVVEQSGLFAGSGGYHVTAGNVN
LIGGAIASTNAGASELTADSLTFTDLKNQMDYSASSGSISGGFGSTGTQKTDDNGNPVQQ
STGEQSRDIGNNIASGNYGKANTGSFMPGVPMSEGGSDTTYTHATLTEGTIKIGGKTTTA
AATGINTDASAAHEAVATLPDVRKILGEQQAMAAAAGTVIATGKQIGDDIAAAAERKADA
IEATYIEGLDTQEKQDAFNALTADQRRDAFMQSDPDYGAASEAKQHWGVGGDYSRALQAV
TTVVVGGVSGQGAGQVASNALAPYAAQLIGRTFDPNHGSNPNAALQLVSHAVLGAVLAEV
NGASVTGGALAGASGELAAQHLTLALYRDDPRAYGPDGKFDPNRLPEADKQTIVALSQAV
GALVSGIAGGDLRNASLGGAIAGNAVENNRMLADAEINRIKTLANGDPQKEARLTIAACA
LVKCSAQYADGSEEKKFWAAVEEKGTTSEYAQERILLESQTDKNYGSLLASKTGRAPSQN
IFDYGFSDYVADGATKLDNENGNPFARLGGLLQATGGITAIASGSAGCLETGASCLLVPW
GIDQTIAGTRTVATGEWTSTLGGMLLSKAGLPTPYAEALYSLAGIAPLGVSHLPVKKIGS
ATAAIDSADDLRQLNSTTYYRVEGGGSGNATSQQRITANPDGSITINPGCIGQLCVSVGN
SDHAVYYLTQKRPDGSVVVFEVDNVLHDKIMKEVVPQKPIPGVPRDPSAPKLVDPSKPDV
PPILSSASVWSPIPYPEEIGREETFY
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
gtgattgccggcgccgacgtcagcatcaccgccggcaatttgctcaaccagggccgcatc
agcggcaccggcgttgtctcgctggaagcgcgcaacgacttgctcaaccagggccagatc
cagggtcgcgacgttgcactggtggctggcaacaacctggtcagcgaagcgtccaaggcc
atcaacggtgttggcatcctgtccggcatcaccgccagcaacaccctgcaactgtttgca
ggcaacgacatgacgctgagcggcacccgcgtgcaggccgatggcagcgcggcgttgatc
gcaggcaacaacctcagcctcacgcccagcgcgttgcgtaacgacaacggcctgctgcgc
ggtggcgatgccgtgtcggtcatcaccggcaaggacctgatcgtctccgcaggcaacgat
ctgcaactgcacggcgtgaccatcaaggctggcggcagcgccgccttgcaggcaggcaac
aacctctcgctgaccccgaccactggtctggatggcaaagtcgccacccgcaccaacatc
agcaccggcgacagtctccagttgacggccggtaacgacctgaccatccgtgaggccgag
gtcaccgcaggcggcgatctcatcgcggcagcaggcaacaacctcaacgtcgaatccgtc
ctcaacgagaccgagaccaacagctacaagagccgcaacggcaagacccgcgtcaccacc
accacgaccacccagagcatcgaccagcaggcgctcactgccggcggcaacctgatccta
agcgccggcaacgacgtcaacctggtcgccgcaaagctggacgccggcaagggcctaggc
atcagcgctggcaacgacatcaacgccagcaccctgaccacggtggacaccagcaacacc
ctagaaacgcgcaagcgcttcaagcagaccaccgcgacccgcgacgaaaccgtctacggc
accgagttcagtgccggcggcaacctggcgatgcaggccggaaacgacatcaccctgacc
gccgccaccgctgcaagcaagaacggcgctatcagcttggctgccggcaacgacgtcaac
ctgctcgccgccagcgagcagcacgatgccgtgcaggacatgaccaagaagaaaaagggc
acgttctccagcaagaccacgaccacgcatgatgagtggcaggacaactttgcgataggt
acggccctgagtggcgagtccgtcaatatctcggctggcaacgatgtggccgtggttggc
tcgaccgtgcttggcaacggcgatgtgcgcctggcagcgggtaacaacgtcactatcgag
tccgcgcaagacaccagcagcgaagcgcatagcttcagccagaagagatccggtctaacc
ggcggcattggtggcggtgttgccagcattggatatagcaaggcgcgcaataacagcgag
aattcgagcaaatcagtcacccaagttgcttcatcggtcggttcaacggacggtaatctc
gtcgtcagtgcaggcaaccagctgaccatcgccgcctcagacatcggtgccggcaaagac
ctgaccctagcggccaaggacatcgccctgctggcacgccaggacacggtcgagtcgcaa
tccagccagtccagcaagtcgagcgggttctcgatgggtgtgacctacgacccgggtgcg
tcgtaccgcagcgcacgcgattcgaccaccaagaacatggtcgacaccggctcgaccata
agcaagatcagccgcgatgccgaaggcgcagccgccggcaccatggcggccattactccg
gtggtgatccaggccagcagccaccgctccaatgcatcgcagaatgaaagcactagcgac
gcacgcgtcagccaattggccgctggcggcaacctgaccttgctggccagcgatggctcg
atcaccagccaaggcgcgcaactgtcggccgaaggtaacggcttgctgctcgccagcaag
gacatcgtgttcgacgttgcgcacaacacccagtccagcggcaacgccagcaacggcaag
tgctggggtttcaacaatgcggccggtttgccgtatggcaactacaaccaacaaggcacc
ggcaacggccagaccgacaccattaccggcacccagttgtcggtcggcggcaacgccagc
ctgaccaccacgcagggggacatcaccctgaccgcgagcaacatcgccgcgcagggcaat
gtgagcctgcgcgcggcaggcgacctgaccatccagagcgggcaggacatcctgggcaat
gccaatcagtccaccagcaagggcatcggcacggtggtcatttccgacaccgagcgcttt
gccggctacaacaaaaagaaccacaccgacgacaacgcacaggtggcgcaggtggccagc
aacgtcggcagcctgggcggcaatgtcagcctgaccgcaggcggcgcgtacacccagtcg
gccagcaatgtggttgcggccaaggacgtggacatcaccgccgcctcgatccagttgctg
accgccaaccagagcagctcggcctcgcagcaggacgacgacctcaagatcggcgcgttc
gcgcgcatcaagtcgccgctgatcgatttgatcaacaacgtggatgacgcccgcaagtca
gatgggcggctcggcgcgatgcagggcatggcggcagcggcaaatgcctatcagtcggcc
agtgcgatcagcagcatggccggtggcgcaggtagcggctcactgctcagcgtggaagcc
ggcgtcggcttcgcgaccagcgagagcagcttcaacagcgccagtcaactttcgcaaggc
tcgaccatcaccggcggtggcaatgtcagcctgaaaaccaccgaaggcgacctgcgcatc
gtgcagggcaacctcaaggccggcgacacgctgagcctggactcggcacgcgatctggtg
ctggaagcgggcaactccagcaacaccgagcagagcaagggcagcaacgccggctttgag
gtcggggtcggcgcatcggtgggcgcgcagaccggcgtgtatgcctacgtgcaagccagt
gcaggcagccacaagtcgaacgtggacggcagcacctggcagaacacgcagctggccggg
cagaagatcgtgctcacgtcggaaggcgataccaccttgcgcggcgcagtggtcaagggt
gacaggatcgatgcacagatcggtggcgacctgaccatcgaatcgctgcaagacaagctt
gacatccagtccaaggaaagcagtgtgggtggccgggtgcaggtctcagcgggtaccgcc
tgggatgccagcggatacgcaagcggcgcccagggcaacggcaactacctgggtgtcgtc
gaacagtcgggcctatttgcaggcagtggcggctaccacgtcactgccggtaacgtaaac
ctgatcggcggcgcgatcgccagtaccaatgccggtgccagcgaactgaccgccgactcg
ctgacgtttaccgatctgaaaaaccagatggactacagcgcctcgtccggcagcatcagc
ggcggctttggcagtaccggcacccagaaaaccgacgacaacggcaacccggtccagcag
agcactggcgaacagtctcgcgacatcggcaacaacatcgccagcggcaactacggcaag
gccaataccggcagcttcatgccgggggtgccgatgagcgaaggcggcagcgacacgacg
tatacccacgccacgctgaccgaaggcaccatcaagatcggtggcaagaccaccacggca
gcggccaccggcatcaacaccgatgccagtgccgcgcatgaagccgttgcgacgttgccg
gatgtacgcaagatcctgggtgagcagcaggcgatggcggcggcagccggcacggtcatt
gcaactggcaagcagattggcgatgacattgcagccgcggcagaacgtaaggccgatgcc
atcgaagcgacgtacatcgaaggcctcgacacgcaggaaaaacaagacgccttcaacgcg
ttgacagccgatcagcgtcgtgacgcattcatgcagagcgacccggactacggcgccgct
tccgaagcgaagcagcattggggcgtcggcggcgactacagccgtgcactgcaagcggtg
accaccgttgtggtgggcggtgtgtcaggccaaggcgccggccaggtcgccagcaacgca
ttggcaccgtacgcggcgcagctgatcggcagaacattcgacccaaaccacggcagcaat
cccaacgcagcattgcaattggtgtcgcacgcggtgcttggtgcggtacttgcggaggta
aacggcgcgtctgtgaccggcggcgcgctggcaggggccagtggcgagttggccgcccaa
cacctcacgctagcgctttaccgtgacgatccccgcgcatacggcccggatggaaagttc
gaccccaaccgcttgccggaagcggataagcagacgatcgtagcgctatcgcaggctgta
ggtgcgttggtaagtgggatcgccggaggcgatttgcggaacgcatcgttggggggagcc
atcgcgggcaatgctgttgaaaacaatcggatgctggccgacgctgaaattaacagaatc
aaaacactcgcaaatggagatccccaaaaagaagctcgccttaccattgcagcctgtgca
ttggtgaaatgctctgctcaatatgcagatggtagtgaagaaaagaaattctgggcggct
gttgaagaaaaaggtacaacatctgaatacgctcaggaacgcattctcctagaaagccaa
acagataagaactatggcagtcttttagcatcaaagacaggaagagcgccaagtcagaat
atttttgattacggtttctcagactatgtggcggatggcgctaccaagttggataatgaa
aatggaaatccattcgcccgtctcggaggtttactgcaggcaaccggcggcattactgcg
attgcgtcaggtagcgcagggtgtttggaaactggcgcatcttgcttgctcgttccttgg
ggcatagatcagacgatagctggtacaaggacggtcgctactggcgaatggacttctacg
ctcggaggcatgctccttagcaaagcaggactacccactccatatgcagaggcactttat
tcactagcaggaattgcaccccttggagtcagtcaccttcccgtaaaaaaaataggtagt
gctactgctgccattgactctgcagacgatctgcgccaactcaattcaacaacatattat
agagttgaaggcggcggttcagggaacgccactagccagcaaagaatcacggcaaatcct
gatggcagtattacaatcaatcccggttgcataggtcaactttgcgtgagcgttggcaac
agcgatcatgcagtttactatctcacccaaaagcgacctgacggatcagttgtggtcttt
gaagttgacaatgttctccatgataaaataatgaaagaagttgtgccccaaaagcccatt
cctggggttccaagagatccgtcagctccgaagttagttgatccgagtaaacccgacgtc
cccccaattttgagtagcgcctcagtttggagtccaattccctaccccgaggagattgga
cgtgaagaaacgttttactga
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