Xanthomonas campestris pv. raphani: XCR_2085
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Entry
XCR_2085 CDS
T01872
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00280
Valine, leucine and isoleucine degradation
xcp00650
Butanoate metabolism
xcp00907
Pinene, camphor and geraniol degradation
xcp01100
Metabolic pathways
xcp01120
Microbial metabolism in diverse environments
xcp04146
Peroxisome
Module
xcp_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
XCR_2085
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
XCR_2085
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
XCR_2085
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
XCR_2085
Enzymes [BR:
xcp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
XCR_2085
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
AEL06972
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Position
complement(2145347..2146243)
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AA seq
298 aa
AA seq
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MSDFVRIVEVGPRDGLQNEANPIATADKIALINQLSATGLRTIEATSFVSPRWVPQLADA
AEVFAGITRQPGIAYPVLVPNLQGYARAHAAGAQEVAVFTAASETFNRTNTNAGIDESIE
RFRPILAQAAQDGVRVRGYVSTVLGCPYQGEVAVADVVDVAERLYRLGCYEISLGDTIGV
GTPAKARQMLAAVAGSIPMQALAVHFHDTYGQALANIAACLEQGVRVVDAAVSGAGGCPY
AKGASGNVASEDVVYLLHGLGMPTGIDLPALARTGRWLAQLLGRETGSKVGKALAAAA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacttcgtacgcattgtcgaagtgggcccgcgcgacggcctgcagaacgaagcc
aacccgattgccaccgccgacaagatcgccttgatcaaccagctctcggccaccgggttg
cgcacgatcgaggcgaccagcttcgtcagcccgcgctgggtgccgcagctggccgacgcc
gccgaggtgtttgcgggcatcacccgccagcccggcatcgcctacccggtgctggtgccg
aacctgcagggctatgcgcgtgcccacgcggccggcgcgcaggaagtggcggtgttcacc
gcggcctccgaaaccttcaaccgcaccaataccaatgccggcatcgacgaatcgatcgag
cgcttccggccgatcctggcgcaggccgcgcaggacggcgtgcgcgtgcgcggctacgtg
tccacggtgctcggctgcccctaccagggcgaggtggcggtggccgatgtggtggatgtg
gccgagcggctgtaccgcctgggctgctacgagatttcgctgggcgacaccatcggcgtc
ggcaccccggccaaggcacgccagatgctggccgcggtggccggcagcatcccgatgcag
gccctggcagtgcacttccacgacacctacggccaggcgctggccaatatcgccgcctgc
ctggagcaaggcgtgcgcgtggtggacgcggccgtgtccggcgccggtggctgcccgtat
gcgaagggtgccagcggcaatgtcgccagcgaggacgtggtctatctgctgcatggcctg
ggcatgcccaccggcatcgacctgcctgccctcgcccgcaccgggcgctggctggcgcag
ctgctgggcagggaaaccggcagcaaggtcggcaaggcactggcagcggccgcctga
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