Xanthomonas campestris pv. raphani: XCR_2096
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Entry
XCR_2096 CDS
T01872
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00220
Arginine biosynthesis
xcp00240
Pyrimidine metabolism
xcp00250
Alanine, aspartate and glutamate metabolism
xcp01100
Metabolic pathways
xcp01110
Biosynthesis of secondary metabolites
xcp01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
XCR_2096 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
XCR_2096 (carB)
00220 Arginine biosynthesis
XCR_2096 (carB)
Enzymes [BR:
xcp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
XCR_2096 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_5
ATP-grasp_3
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
AEL06983
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All DBs
Position
2155052..2158294
Genome browser
AA seq
1080 aa
AA seq
DB search
MPKRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNM
ADAVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADHGVLEKYNVELIGAKR
EAIRMAEDRELFRVAMGEIGLDCPRAEVAHTLEEALDIQTRVGYPTIIRPSFTLGGSGGG
IAYNREELIDIVGRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCAIENLDPM
GVHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGISPTTGRVVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIP
RFAFEKFPQADARLTTQMKSVGEVMAMGRTFQESLQKALRGLETGKIGLDPTGLDLGSED
DMAALKRELKAPGPERLFYVGDAFRAGMSVADVYALSFIDPWFLDQIEELISLEQQLADD
GMAALDAPRLRLLKRAGFSDARLAELIGTNEEAVRTLRRALKVRPVYKRVDSCAAEFATS
TAYLYSTYEDECEALPSNRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGFETIMVN
CNPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQYGGQTPLKLARALEANGVP
VIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNADEALVLAREIGYPLVVRPSYVL
GGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIADKDGNVLIGGVM
EHIEEAGVHSGDSSCSLPPYSLSAETQAELRRQVVMLAEGLNVVGLMNTQFAVQVNDAGD
DIVYLLEVNPRASRTVPFVSKATGMPLAKIAARCMAGKTLAEQGATKEIVPDYYSVKEAI
FPFAKFQGVDPILGPEMRSTGEVMGVGRSFGAAFARAQEAGGIKAPPLGKAFVSVRDPDK
QRVLPVAQALVERGFTLVATRGTGAWLQQHGLSCEIVNKVAEGRPHIVDSIKNGEIVYIV
NTTEGRAAISDSFSIRREALQHRVTYSTTVAGAKALVHSLEFRGTGPVWSLQELHKELEA
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcgcaccgaccttaaaaccatcctgatcatcggcgctggcccgatcgtcatc
ggccaggcctgcgagttcgactactccggcgcgcaggcgtgcaaggcgctgcgcgacgag
ggttatcgcgtggtgctggtcaacagcaacccggccacgatcatgaccgacccgaacatg
gccgacgccgtgtacatcgagccgatcaactggcagacggtcgagaagatcatcgccaag
gaaaagcccgatgccctgctgccgacaatgggcggccagaccgcgctgaactgcgcgctg
gacctggccgaccacggcgtgctggagaagtacaacgtcgagctgatcggtgccaagcgc
gaagcgatccgcatggccgaagaccgcgagctgttccgcgtggcgatgggcgagatcggc
ctggattgcccccgggccgaagtggcgcacacgttggaagaagcgctggatatccagacc
cgcgtcggctacccgaccatcatccgccccagcttcacgcttggcggcagcggtggcggc
attgcatacaaccgcgaagagctgatcgacatcgttggccgcggcctggaactgtcgccg
accaccgaagtgctggtggaagaatcggtgctgggctggaaggaattcgagatggaagtt
gtgcgcgataccgcggacaactgcatcatcgtgtgtgcgatcgaaaacctcgacccgatg
ggcgtgcacaccggcgactcgatcaccgtggcgccggcgcagacgctcaccgacaaggaa
tatcagcgcctgcgcgatgcctcgatcgcggtgctgcgcaagattggcgtggataccggc
ggctccaacgtgcagttcggcatcagcccgaccaccggccgcgtggtggtgatcgaaatg
aatccgcgcgtgtcgcgttcgtcggcgctggcgtccaaggccaccggctttccgatcgcc
aaggtcgccgccaagctggcggtgggttacacgctggacgaattgaagaacgaaatcacc
ggtggcctgaccccggcctcgttcgagccgtccatcgactacgtggtcaccaaaattccg
cgctttgcctttgaaaaattcccgcaggccgatgcacgcctgaccacgcagatgaagtcg
gtcggcgaagtcatggcgatgggccgcaccttccaggaatcgctgcagaaagccctgcgt
ggcctggaaaccggcaagatcggcctggacccgaccggcctggatctgggcagtgaagac
gacatggccgcgctcaagcgcgagctcaaggctccgggcccggagcgtctgttctacgtg
ggcgatgcgttccgtgccggcatgagcgtggccgatgtgtatgcgctgtcgttcatcgac
ccctggttcctggaccagatcgaagagttgatcagcctcgagcagcagctggccgacgat
ggcatggcggcactggatgccccacgcctgcgcctgctcaagcgcgccggtttctccgac
gcacgcctggccgagctgatcggcaccaacgaagaagccgtgcgcacgctgcgccgcgcg
ctcaaggtgcgcccggtgtacaagcgcgttgactcgtgtgcggctgaattcgccaccagc
actgcgtacctgtattcgacctacgaggacgagtgcgaagcgctgccgagcaaccgcgac
aagatcatgatcctgggcggtggccccaaccgcatcgggcagggcatcgagttcgactac
tgctgcgtgcacgcggcactggcgctgcgcgatgacggcttcgagaccatcatggtcaac
tgcaacccggaaaccgtctccaccgactacgacacctccgaccgcctgtacttcgagccg
ctgacgctggaagacgtgctggagatcgtcgagctggagcagcccaagggcgtgatcgtg
cagtacggcggccagaccccgctgaagctggcgcgtgcgctggaagccaacggcgtgccg
gtgatcggcacctcgccggactcgatcgatctggccgaagaccgcgagcgcttccagcag
ctggtcgacaagctgggcctgaagcagccgccgaaccgcattgcccgcaatgccgacgag
gccttggtgctggcgcgcgaaatcggctacccgttggtggtgcgcccgagctatgtgctg
ggcggccgcgcgatggaaattgtgtacggcgaatccgacctggcgcgctatgtgcgcgat
gcggtgaaggtctccaacgattcgcccgtgttgctggaccgcttcctcgacaacgcggtg
gaagtggacgtggacatcattgccgacaaggacggcaacgtgctgatcggcggggtgatg
gagcatatcgaagaagccggcgtgcattcgggcgattcgtcctgctcgctgccgccgtat
tcgctgtcggccgaaacccaggccgagctgcgtcgccaggtggtgatgctggccgaaggc
ttgaatgtggtcggcctgatgaacacccagttcgcggtgcaggtcaacgacgccggcgat
gacatcgtgtacctgctggaagtgaacccgcgtgcctcgcgcaccgtgccgttcgtgtcc
aaggccaccggcatgccgctggccaagatcgctgcacgctgcatggccggcaagacgctg
gccgagcagggcgccaccaaggaaatcgtgccggactactactcggtgaaggaggcgatc
ttcccgttcgccaagttccagggcgtggacccgatcctcgggccggagatgcgctccacc
ggtgaggtgatgggcgtgggccgcagcttcggcgccgcgtttgcgcgcgcgcaggaagcc
ggcggcatcaaggcgccgccgctgggcaaggccttcgtgtcggtgcgcgatccggacaag
cagcgcgtgttgccggtggcccaggccctggtggagcgcggcttcaccctggtggccacg
cgtggcaccggtgcgtggttgcagcagcacggcctgagctgcgagatcgtcaacaaggtg
gccgaagggcggccgcatatcgtcgactcgatcaagaacggcgagatcgtctacatcgtc
aacaccaccgaagggcgcgcggcgatctccgattcgttctcgatccgccgtgaagcgctg
cagcatcgcgtgacctattcgaccaccgtcgccggcgccaaggcgctggtgcattcactg
gaattccgcggcaccggccccgtctggtcgctgcaggaactgcacaaggagctggaagca
tga
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