Xanthomonas campestris pv. raphani: XCR_2109
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Entry
XCR_2109 CDS
T01872
Symbol
rpfC
Name
(GenBank) two-component system sensor-response regulator hybrid protein RpfC
KO
K10715
two-component system, sensor histidine kinase RpfC [EC:
2.7.13.3
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp02020
Two-component system
xcp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XCR_2109 (rpfC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XCR_2109 (rpfC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xcp01001
]
XCR_2109 (rpfC)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xcp02022
]
XCR_2109 (rpfC)
Enzymes [BR:
xcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
XCR_2109 (rpfC)
Protein kinases [BR:
xcp01001
]
Histidine kinases
Other
XCR_2109 (rpfC)
Two-component system [BR:
xcp02022
]
Other families
RpfC-RpfG (cell-to-cell signaling)
XCR_2109 (rpfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
Hpt
DUF6463
PDE8A_N
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AEL06996
LinkDB
All DBs
Position
2171168..2173348
Genome browser
AA seq
726 aa
AA seq
DB search
MKSPLPWLKRRLSGRADSEHAQNLIRIIITTLFISYLGWRYQHTHGDTLMATWLILVGEL
LVSLGLMVAILLRPQVSHTRRLIGMLLDYTCTGAIMAIQGEPASPLYAVCMWVTIGNGLR
YGSNYLRAATAMGSLCFLGAILISPYWKANPYLSWGLLLGLIAVPLYFDSLLRAMTRAVR
EARHANQAKSRFLANMSHEFRTPLNGLSGMTEVLATTRLDAEQKECLNTIQASARSLLSL
VEEVLDISAIEAGKIRIDRRDFSLREMIGSVNLILQPQARGRRLEYGTQVADDVPDLLKG
DTAHLRQVLLNLVGNAVKFTEHGHVLLRVTRVSGSAEDAVRLRFDVEDTGIGVPMDMRPR
LFEAFEQADVGLSRRYEGTGLGTTIAKGLVEAMGGSIGFRENQPSGSVFWFELPMAIGEP
LKSSTVRVPTGALVDAPEELESSNIIAFSNPFLRHRARVRSMRMLVADDHEANRMVLQRL
LEKAGHKVLCVNGAEQVLDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPV
VVLSADVTPEAIRACEQAGARAFLAKPVVAAKLLDTLADLAVSTRQLATPATTVQVATSF
EGVLDSSVLDELAALGMGEEFERQFVRQCLDDAQNCVGDIERDGTCSDWEQLRESAHALR
GVASNLGLAQVASSGGELMRMADWQLQAEWRLRLSTLREQLKAGKDALDARVQGVKDGEC
SPRSNE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctccattgccatggttgaagcggcgcctgtcagggcgagcagattcggaacac
gcgcagaatctgatccgcatcatcatcaccacattgttcatttcgtacctgggatggcgc
tatcagcacacccacggcgataccttgatggccacctggttgatcttggtcggcgagctg
ctggtgtcgttgggcttgatggtggcaatcctgctgcgaccgcaggtgtcgcatacgcgc
cggctgatcgggatgctgctcgactacacctgcaccggcgcgatcatggccatccagggc
gagccagcctcgccgctgtatgcggtgtgcatgtgggtgaccatcggcaacggtctgcgc
tatggcagcaactatctgcgtgcggcgaccgcaatgggcagcctgtgttttctcggcgcc
atcctgatttctccttattggaaagccaatccctatctgagttgggggttgttgctgggc
ctgattgcggtgccgctgtacttcgactcgctgttacgtgcgatgacccgtgcagtgcgc
gaagcccggcacgccaaccaggccaagagccgcttcctggccaatatgagccatgagttc
cgcacgccgctcaacgggctgtcgggcatgaccgaagtgctggcgaccacgcgcttggac
gccgagcagaaggagtgcctcaacaccatccaggcatcggcgcgcagcctgctgtcgctg
gtggaagaggtgctggatatttcggcgatcgaggccggcaagatccgtatcgatcgccgc
gacttctcgctgcgcgagatgatcggctcggtcaacttgatcctgcagccgcaggccagg
gggcgccggctggagtacggcacgcaggtggccgacgacgtgcccgacctgctcaagggc
gacaccgctcatctgcgtcaggtactgctcaatctggtcggcaatgcggtcaagttcacc
gagcacgggcatgtgttgctccgggtcacgcgcgtgtccgggagtgccgaggacgccgtc
cggttgcgcttcgatgtggaagacaccggcatcggcgtgccgatggacatgcgcccgcgg
ctgttcgaggcctttgagcaggccgatgtcgggttgtcgcgccgttacgagggcaccggc
ctgggcaccaccatcgccaagggccttgtagaggcaatgggaggcagtatcgggttcagg
gaaaatcagccaagcggcagcgtgttctggttcgagctgccgatggcgatcggcgagccg
ctgaaatcttcgaccgtacgggtgccgaccggggcgttggtggatgcgcccgaggagttg
gaatcttccaacatcatcgctttttccaacccattcctgcgtcatcgcgcacgtgtgcgc
agtatgcgcatgctcgtggccgacgaccacgaagccaaccgcatggtgctgcagcggttg
ctggagaaggctgggcataaggtgctgtgcgtcaacggcgccgagcaggtgctcgatgcg
atggccgaagaggattacgacgcggtgattgtggatctgcacatgccgggcatgaacggc
ctggacatgctcaagcaattgcgggtgatgcaggccagtggcatgcgctacacgccagtg
gtggtgctcagcgccgacgtgacgcccgaagcgattcgcgcctgcgaacaggccggcgcg
cgtgcgtttctggccaagcctgtcgtggcggccaagttgctcgacaccctggccgatctg
gcagtgagcacccggcagttggcgacgccggcaaccacggtgcaggtggcgacaagtttc
gaaggcgtgctcgattccagcgtgctggacgagctggccgcgctgggcatgggcgaggaa
ttcgaacgccagttcgtgcgccagtgtctggacgatgcgcagaactgcgtgggcgatatc
gaacgcgatggcacgtgctcggactgggaacaactgcgcgagagtgcgcatgccttacgc
ggcgtggccagcaaccttggtctggcgcaggttgccagcagcggtggcgagctgatgcgc
atggccgattggcagctgcaggcagaatggcggctgcggctgtccacactgcgcgagcag
ttgaaggcgggaaaggatgcactcgacgcacgcgtgcagggcgtcaaggacggcgagtgc
tccccccgtagcaacgaatag
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