Xanthomonas campestris pv. raphani: XCR_2110
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Entry
XCR_2110 CDS
T01872
Symbol
rpfF
Name
(GenBank) RpfF protein
KO
K13816
DSF synthase
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp02020
Two-component system
xcp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XCR_2110 (rpfF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XCR_2110 (rpfF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ECH_1
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AEL06997
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Position
complement(2173361..2174230)
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AA seq
289 aa
AA seq
DB search
MSAVQPFIRTNIGSTLRIIEEPQRDVYWIHMHADLAINPGRACFSTRLVDDITGYQTNLG
QRLNTAGVLAPHVVLASDSDVFNLGGDLALFCQLIREGDRARLLDYAQRCVRGVHAFHVG
LGARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRI
SAHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRGQGVAAVEQVIRESKRTPHAWAAMQQVR
EMTTAVPLEEMMRITEIWVDTAMQLGEKSLRTMDRLVRAQSRRSGLDAG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagttcaacccttcattcgtaccaatattggctcgaccctacgcatcatcgaa
gaaccgcagcgtgacgtttactggatccatatgcatgccgacctggccatcaatcccggg
cgggcctgtttctcgacacgcctggtcgacgacatcactggctaccagaccaacctggga
caacgcttgaatactgccggtgtgctggcgccgcacgtggtgctggcatcggacagcgac
gtgttcaatctgggcggtgatctggccctgttctgccaactgatccgcgaaggcgaccgc
gcccgccttctcgactacgctcaacgctgcgtgcgcggcgtgcatgcctttcatgtcggc
ctgggcgcgcgtgcgcacagcattgcgctggtccagggcaatgcgcttggcggcgggttc
gaagcggcactaagctgccacaccatcattgccgaggaaggcgtgatgatggggctgccc
gaagtgctgttcgacctatttccggggatgggcgcctactccttcatgtgccagcgcatc
agtgcgcacctggcgcaaaagatcatgcttgaaggcaacctgtattcggccgaacagctg
ctcggcatgggcctggtcgaccgtgtggtaccgcgtggccagggcgtggccgcagtggaa
caggtgatccgcgagagcaagcgcacgccacacgcgtgggcggcgatgcaacaagtgcgc
gaaatgaccaccgccgtgccgcttgaggagatgatgcgcatcaccgaaatctgggtagat
accgccatgcaactcggcgaaaaatcactgcgtaccatggaccgcctggtgcgcgcgcag
tcgcgtcgctcagggctcgacgcgggctga
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