Xanthomonas campestris pv. raphani: XCR_2239
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Entry
XCR_2239 CDS
T01872
Name
(GenBank) putative signal protein with PAS, PAC, GGDEF and EAL domains
Organism
xcp
Xanthomonas campestris pv. raphani
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_4
PAS
Motif
Other DBs
NCBI-ProteinID:
AEL07124
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Position
2324288..2327050
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AA seq
920 aa
AA seq
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MLQHPLTSAVVLLDAHGQPLAANRVAQSLGLPATLGAYAEVLESSRAQIAESGGMAACVL
PGSGGGRLEGWLRAVCDEQGQVMAFTLSIPEPLGADGTSRWEIGLDSADHGLWDWDIAAD
VVYRSERWTRMLGYSEQPLPNNLTALSGLIHPDDHAQVSAAVQAHLDGRTDTYVAEFRLR
QHDGQWRWILDRGRVVSRTSDGRPLRMVGTHTDVHHHKLLEQQLREQQAQLEEAQRIASM
GSWGWDTLKDQLWVSQDFLQQLGLADLRLHSVRDVLRLLAGPSVAHLRSAWRKIKHEGMP
VHFELEINGRLGVNPHHLRVWAQPVFDGDGALVRVLGQLQNVTEQRQTDALIRWRTELLN
RVSALGKIGGCEIEVDTRRMQWTEECYRIHGLRKENITLEQALSLYTQDSRDAFEAALLR
ILDGGLPEQLELCFYRNSGQRVWVQVLIELDRREGLPPRYVALFRDVSREREANERIELL
AHYDRLTGLPNRFLLREQAENAIREAHERGQVMAMLLIDLDGFKSINDSFGHATGDNLLK
LASSRLHQHLRNSDLFGRFSDDEFIVLLRDLSEPEDAGHVARKLISALGEPLRKDHVTLK
LGASIGIALQGEGLSDFDSLLRAADAAMYAAKDSGRNTFHYYSQDVLLRAQRRLELEHAL
HGALEREEFTLVYQPLVNTVGDTSPAIEALMRWNRPGHGPCSPAEFIPIAEECGEIVRLG
EWVIGEACRQAVVWDRAGLHFSRIAVNVSAVQLRERGFAERVLEICRDNGWSPARLELEL
TESALIRDSDSLRRCFELFEQNGVLLAVDDFGTGFSNLHYLNRFPVQRLKIDRSFVQGML
DDANTAEVTQAIVHLGHALGMQVVAEGVETVQEDALLRQQGCDEIQGYFYSRPLSPRDMA
QWLREAEAGMRLGARLVIAS
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcacccgctgacctcagcggtggtgttgttggatgcgcatggccagcccctg
gcggccaaccgcgtcgcgcaatcccttggattgccggcaacccttggcgcatacgccgaa
gtgctggaaagcagccgtgcccagatcgccgaaagcggcggcatggcggcgtgcgtgctg
ccgggcagcggcggtgggcgcctggaagggtggctgcgcgcggtctgcgacgaacaaggc
caggtcatggccttcaccctgagcattcccgagccactgggcgccgatggcaccagccgc
tgggaaatcggcctggacagcgccgaccacgggctctgggactgggacatcgccgccgac
gtggtgtaccgctccgaacgctggacccgcatgctgggttactccgaacagccgctgccg
aacaatctcaccgccctgtccgggctgatccatcctgacgaccatgcgcaagtcagcgcg
gccgtgcaggcgcatctggacgggcgcaccgatacctacgtggccgagttccggctgcgt
cagcacgatggccagtggcgctggatcctggatcgcggccgcgtggtatcgcgcacctcc
gacggtcgcccgttgcgcatggtcggcacgcataccgacgtgcatcaccataaattgctc
gagcagcagctgcgcgagcagcaggcccagctcgaagaagcccagcgtattgccagtatg
ggcagctggggctgggacaccttgaaggaccagctgtgggtgtcgcaggatttcctgcag
cagcttggcctggcggacctgcggctgcacagcgtgcgcgacgtgctgcgtctgctggct
ggcccgtccgtggcacacctgcgcagcgcctggcgcaagatcaagcacgaagggatgccg
gtgcatttcgagctggagatcaacggcaggctcggggtcaatccacatcatctgcgcgtc
tgggcacagccggtgttcgacggcgacggcgcactggtgcgcgtgctcggccagctgcag
aacgtgaccgagcagcggcagaccgacgccctcatccgttggcgtaccgagttgctcaac
cgcgtgtctgcgctgggcaagatcggtggctgcgagatcgaggtggacacccgccgcatg
cagtggaccgaggagtgctaccgcatccatggtctgcgcaaggaaaacatcaccctggag
caggcgctgtcgctgtacacccaggattcgcgcgacgccttcgaagcggctttgctgcgc
atcctcgatggtgggctgccggaacagctggagctttgcttctaccgcaactccgggcag
cgggtgtgggtgcaggtgctgatcgagctggaccgtcgcgaaggcctgccgccgcggtat
gtggcgctgttccgcgatgtcagtcgcgaacgcgaagccaatgagcggatcgaattgctt
gcgcattacgaccgcctgactggtctaccaaaccgcttcctgctgcgcgaacaggccgag
aacgccatccgcgaagcacatgagcgtggccaggtgatggccatgctgctgatcgacctg
gatggcttcaagagcatcaacgattcgttcggccatgccaccggcgacaacctgctcaag
ctcgcgtcctcgcgcctgcaccagcatttgcgcaacagcgatctgtttggccgcttcagc
gacgacgagttcatcgtgctgctgcgcgatctttccgagccagaagacgccggccatgtg
gcacgtaagctgatcagcgcgctgggcgagccgctgcgcaaggaccacgtcaccctcaag
ctcggtgccagcatcggtattgcgttgcagggtgaaggcctgtcggatttcgacagcctg
ctgcgcgccgccgatgcggcgatgtatgcggccaaggattccgggcgcaacaccttccat
tactacagccaggatgtgctgctgcgcgcgcagcgccgcctggagctcgagcacgcgctg
catggcgcgttggagcgcgaagaattcaccctggtctaccagccgctggtcaacacggtg
ggcgatacctcgccggcgattgaagcgctgatgcgctggaatcgccccggccatggtccc
tgcagcccggccgaattcatcccgattgccgaagagtgcggcgagatcgtgcgcctgggc
gagtgggtgattggcgaagcctgccgccaggccgtggtgtgggaccgcgccggcctccat
ttcagccgcatcgcggtgaatgtgtctgctgtgcagctgcgcgagcgcggctttgccgag
cgcgtgctggaaatctgccgcgacaacggctggtcgccggcacggctggagctggaattg
accgaatcagccttgatccgcgattcggactcactgcgccgttgcttcgaactgttcgaa
cagaacggcgtgttgctcgcggttgacgacttcggtaccggcttctccaacctgcattac
ctcaaccgcttccccgtgcagcggctgaagatcgaccgcagcttcgtgcagggcatgctc
gacgatgccaacacggccgaagtcacgcaggcgatcgtgcatctgggccatgcgctcggc
atgcaggtggtcgccgagggcgtggaaaccgtgcaggaagatgccttgctgcgtcagcag
ggctgcgacgaaatccagggttacttctattcgcgcccactctcgccgcgcgacatggcg
cagtggctgcgcgaagccgaagccggcatgcgcctgggcgcacgcctggtcatcgccagc
tga
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