Xanthomonas campestris pv. raphani: XCR_2257
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Entry
XCR_2257 CDS
T01872
Name
(GenBank) 3-ketoacyl-CoA thiolase
KO
K00632
acetyl-CoA acyltransferase [EC:
2.3.1.16
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00071
Fatty acid degradation
xcp00280
Valine, leucine and isoleucine degradation
xcp00362
Benzoate degradation
xcp00592
alpha-Linolenic acid metabolism
xcp00907
Pinene, camphor and geraniol degradation
xcp00984
Steroid degradation
xcp01100
Metabolic pathways
xcp01110
Biosynthesis of secondary metabolites
xcp01120
Microbial metabolism in diverse environments
xcp01212
Fatty acid metabolism
Module
xcp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
XCR_2257
00592 alpha-Linolenic acid metabolism
XCR_2257
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
XCR_2257
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
XCR_2257
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
XCR_2257
00642 Ethylbenzene degradation
XCR_2257
00984 Steroid degradation
XCR_2257
Enzymes [BR:
xcp01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.16 acetyl-CoA C-acyltransferase
XCR_2257
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Gene cluster
GFIT
Motif
Pfam:
Thiolase_N
Thiolase_C
ketoacyl-synt
ACP_syn_III
Thiolase_C_1
HrpF
ACP_syn_III_C
Motif
Other DBs
NCBI-ProteinID:
AEL07142
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Position
complement(2346248..2347453)
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AA seq
401 aa
AA seq
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MSKQIQEAYIVAATRTPVGKAPKGVFRNTRPDDMLAHVLRAVVAQAPGIDLSRIDDAIIG
CAMPEGEQGMNVARIGVLLAGLPNSVAGQTINRFCSSGIQAVAMAADQIRLGNADLMLAG
GTESMSMVPMMGNKVAMSPNVFADDHVAIAYGMGITAEKVAEEWKVSREDQDAFALASHQ
KAIAAIAAGEFRDEITPYEILSHQPDLQGNVIALRKRLVDTDEGPRPDSSLEGLAKLRPV
FRNGQFGGSVTAGNSSQMSDGAGAVLLASEQAIKDYGLTPLARFVSFSVAGVRPEVMGIG
PIAAIPKALKQAGLTKDQIDWIELNEAFAAQALAVIRDSELDPSKVNPLGGAIALGHPLG
ATGAIRAATLVHGLRRRQQKYGMVTMCIGTGMGAAGIIEAL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcagattcaagaagcctacatcgttgccgccacgcgtacgccggtgggcaag
gcgccgaagggcgtgttccgcaatacccgtcctgacgacatgctggcgcacgtgttgcgt
gcggtggtggcgcaggcgccgggcatcgatttgtcgcggatcgacgatgcgatcatcggc
tgcgcgatgcccgagggcgagcaaggcatgaacgtggcgcgcatcggcgtgctgctggcc
ggcctgcccaattccgtggccggtcagaccatcaaccgcttctgttcgtccggcatccag
gccgtggcgatggcggccgaccagatccgtctgggcaacgccgacctgatgctggccggc
ggcaccgagtcgatgtcgatggtgccgatgatgggcaacaaggtcgccatgtcgccgaac
gtgttcgccgacgaccatgtcgccatcgcctacggcatgggcatcaccgccgagaaggtc
gcggaagaatggaaggtctcgcgcgaggatcaggacgcgtttgcgctcgcttcgcatcaa
aaagccatcgctgcgattgccgcaggcgagtttcgcgatgagatcactccgtacgaaatt
ctctcgcaccagcctgacctgcaaggcaatgtcatcgcgctgcgtaagcggctggtcgac
accgatgaaggcccacgccctgacagctcgctcgaaggcctggccaagctgcgcccggtg
ttccgtaacggccagttcggcggcagcgtcaccgccggcaactcctcgcagatgagcgac
ggcgccggtgcggtgctgctggcgtcggagcaggcgatcaaggattacggcctgaccccg
ctagcccgtttcgtcagcttctcggtggcaggggtgcgcccggaagtgatgggcatcggt
ccgatcgcggccattcccaaggcgctcaagcaggccggcctgaccaaggaccagatcgac
tggatcgaactcaacgaagccttcgccgcgcaggcactggccgtgatccgcgacagcgaa
ctggatccgtccaaggtcaacccgctgggcggcgcgatcgcgctgggtcacccgctgggc
gccaccggcgcgatccgtgccgccacgctggtgcacggcctgcgccgtcgtcagcagaag
tacggcatggtcacgatgtgcatcggcaccggcatgggcgctgcgggcatcatcgaagcg
ctgtaa
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