Xanthomonas campestris pv. raphani: XCR_2288
Help
Entry
XCR_2288 CDS
T01872
Symbol
nirB
Name
(GenBank) nitrite reductase
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00910
Nitrogen metabolism
xcp01100
Metabolic pathways
xcp01120
Microbial metabolism in diverse environments
xcp01310
Nitrogen cycle
Module
xcp_M00531
Assimilatory nitrate reduction, nitrate => ammonia
xcp_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
XCR_2288 (nirB)
Enzymes [BR:
xcp01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
XCR_2288 (nirB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Pyr_redox
Rubredoxin_C
NIR_SIR_ferr
Pyr_redox_3
DAO
Amino_oxidase
NAD_binding_8
AlaDh_PNT_C
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
AEL07173
LinkDB
All DBs
Position
2377139..2379592
Genome browser
AA seq
817 aa
AA seq
DB search
MKQPRLVVIGNGMAGIRTVEELLKLMPGMYHITVFGAEPHPNYNRILLSPVLAGEQEFDD
IVLNPLQWYRDNGIHLHLNKEVVRIDRVRRRVIAADGTEAEYDRLLIATGSVPFVLPIPG
NDLKGVIGYRDIQDTRTMIETARTRQHAVVIGGGLLGLEAANGLKVRGMEVTVVHLAGWL
LERQLDPVAGNLLQQALRARGLEFRLNTATSALLGNAQGEVIGVRFADGSEIPADLVVMA
AGIRPNTRLAEEAGIHCSRGIVVNDSLQSFDPRVYAVGECANHRGIAYGLVAPLFEQAKV
CANHLAQFGIGIYRGSVASTKLKVTGIDLFSAGDFMGGDGCEEIVLSDPAGGVYKKLVIR
DDVLVGACLYGDTSDGGWYFKLLKDGTPIQAQRDQLIFGESALGDAGTGGQDRASAMSDS
DEVCGCNGVCKGTIVKAISEQGLFTVDEVKKHTKAASSCGSCTGLVEQILMNCLGSNFQE
TPKTKAVCACTDLSHGEVRRAIREHKLLTHAQAYAFMEWRTPNGCATCRPAINYYMLSTW
PHEAIDDPQSRFINERAHANIQKDGTFSVIPQMKGGVTNASELRRIADVADKYAVPMVKV
TGGQRIDLLGVKKEDLVDVWRDLGMQSGHAYGKSIRTVKTCVGSEFCRFGTQNSTQMGID
LETMLANMWSPHKVKLAVSGCPRNCAESGIKDVGIIAVDSGWELHVGGNGGIKTEVARFL
VKVTTAEEVREYAGAFLQLYREQAYYLDRTVHYIARVGLDYIRAQVVDDAANRRALYERL
LYSLEGLVDPWKARIAGERRQEYQPLRIAAPAATVEE
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaacccagactcgtcgtcatcggcaacggcatggccggcatccgcaccgtggag
gaactgctcaagctgatgccgggcatgtaccacatcaccgtgttcggggccgagccgcat
cccaactacaaccgcatcctgctctcgccggtcttggccggcgagcaggagttcgacgac
atcgtgctcaacccgctgcagtggtaccgcgacaacggcatccatctgcacttgaacaag
gaagtcgtgcgcatcgaccgcgtgcgtcgccgcgtgatcgccgccgacggcaccgaagcc
gagtacgaccgcctgctgatcgccaccggctcggtgccgttcgtgctgccgattcccggc
aacgacctgaaaggggtcatcggctaccgcgatatccaggacacgcgcaccatgatcgag
accgcgcgcacccgccaacacgcggtggtgatcggtggcggcctgctgggcctggaagcg
gccaacggactgaaagtgcgcggcatggaggtcaccgtggtgcacctcgccggctggttg
ctggaacgccagctcgacccggtggccggcaacctgctgcagcaggccttgcgcgcacgc
gggctggagttccgcctgaacaccgccaccagcgcgctgctcggcaatgcgcagggcgag
gtgatcggggtgcggtttgccgatggcagcgagatcccggccgacctggtggtgatggcc
gccggcatccgcccgaatacgcgccttgccgaggaagccggcatccattgttcgcgtggc
atcgtggtcaacgacagcctgcaaagcttcgacccgcgcgtgtatgcggtgggcgagtgc
gccaaccatcgcggcattgcgtacggactggtggcgccgttgttcgagcaggccaaggtg
tgcgcgaaccatctggcgcagttcggcatcggcatctatcgcggctcggtggcgtcgacc
aagctcaaggtcaccggcatcgacctgttctctgcaggcgatttcatgggcggcgatggc
tgcgaggaaatcgtgctgtcggatccggccggcggcgtctacaagaaactggtgatccgc
gatgacgtgctggtgggggcgtgcctgtatggcgacaccagcgatggcggttggtatttc
aagttgctcaaggacggcacgccgatccaggcgcaacgcgaccagttgatcttcggtgaa
agcgcactgggcgatgcgggcaccggtggccaggaccgcgccagcgcgatgtcagacagc
gacgaagtctgcggttgcaatggcgtgtgcaagggcaccatcgtcaaggcgatcagcgag
caaggcctgttcaccgtggacgaggtgaagaagcacaccaaggcagcgagttcgtgtggc
tcctgcaccgggctggtggagcagatcctgatgaactgcctgggctccaacttccaggaa
acccccaaaaccaaggcggtttgcgcctgcaccgatctgagtcatggcgaagtgcggcgt
gccattcgcgagcacaaactgctgacccacgcgcaggcctatgccttcatggaatggcgc
acacccaacggctgtgccacctgccggccggcgatcaactactacatgttgtcgacctgg
ccgcatgaagccatcgacgacccgcagtcgcgtttcatcaacgaacgcgcgcacgccaac
atccagaaagacggcacgttctcggtgattccgcaaatgaagggcggggtgaccaatgcc
agcgaactgcgccggattgccgatgtcgccgacaaatacgcggtgccgatggtcaaggtg
accggcggccagcgcatcgatctgctcggggtcaagaaggaagacctggtggatgtatgg
cgcgacctgggcatgcagtccgggcatgcgtacggcaagtcgatccgtaccgtgaagacc
tgcgtgggcagcgagttctgccgcttcggcacgcagaacagcacgcagatgggcatcgat
ctggaaaccatgctcgccaacatgtggagcccgcacaaggtgaagctggcggtgtctggc
tgcccgcgcaattgcgctgaatccggcatcaaggacgtgggcatcatcgcggtggattcg
ggctgggaattgcatgttggcggtaatggcggcatcaagaccgaggtggcgcgttttctg
gtcaaggtgaccaccgccgaagaggtgcgcgaatacgccggcgcgtttctgcagctctac
cgcgaacaggcctattacctggatcgcaccgtgcactacatcgcgcgcgtggggctggac
tacatccgcgcgcaggtggtggacgacgccgccaaccggcgcgcgctctacgagcgcctg
ctgtattcgctcgaaggcctggtcgacccgtggaaggcccgcatcgccggcgaacgccgc
caggaataccaaccgctgcgcattgccgcgccagccgccacggtggaggaatga
DBGET
integrated database retrieval system