Xanthomonas campestris pv. raphani: XCR_2373
Help
Entry
XCR_2373 CDS
T01872
Symbol
hemN
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00860
Porphyrin metabolism
xcp01100
Metabolic pathways
xcp01110
Biosynthesis of secondary metabolites
xcp01240
Biosynthesis of cofactors
Module
xcp_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
XCR_2373 (hemN)
Enzymes [BR:
xcp01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
XCR_2373 (hemN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
AEL07256
LinkDB
All DBs
Position
complement(2482754..2484166)
Genome browser
AA seq
470 aa
AA seq
DB search
MEPDIAAAHARWNFDHALLQRYDRPGPRYTSYPTAPHFQPGFGATELQAAFLRAQQQRPG
RALSLYVHVPFCSSPCFYCGCNRIITRDATKGQAYVARLLREATSLAEHLERGRTVVQLH
LGGGTPNFLSPALLGDLLDGLRRIFRLSIDPGRDISIELDPRAVQSGDIAALAQLGFTRV
SLGIQDFDPDVQAAINRRQGEQETLELIAACRQAGIASVNVDLVYGLPRQTQAGFARTLD
RVLAARPDRLAIYGYAHLPHVFKAQQQIDVQELPSAQDRLALLGLAVHTLSAAGYQYIGM
DHFALPSEDLAIAQRRGDLQRNFMGYTTHADTDLIGLGVSAISHVGDSYSQNPRELAAWE
AAVDRGALPVCRGMQLSADDLLRAEVIQALLCCGRVDLAAVAQRHQCDARHCFDDALAAL
EVLAADGLVEVRGLCVDVTATGRPLVRLAAMCFDRYLQPSEQAVRYSKAI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgatatcgctgccgcgcatgcccgttggaacttcgatcacgcgttgttgcaa
cgctacgaccgcccaggcccgcgctacacctcctatcccactgcgccgcactttcagccc
gggtttggtgccacggagttgcaggcggcgttcttgcgcgcgcagcagcagcgccctggg
cgcgccttatcgctgtacgtgcatgtgccgttttgcagcagtccctgtttctactgcggc
tgcaatcggatcatcacgcgcgacgcgaccaaggggcaggcctatgtcgcgcggctgctc
cgcgaggcgaccagcctcgccgagcatctggagcgcggtcgaacggtcgtgcaactgcat
ctcggtggcggaacgcccaattttctctcgcctgcgctgcttggcgacttgctcgatggc
ctgcgtcgcatctttcgtttaagtatcgatcccggtcgcgacatctcgatcgaactggat
cctcgcgctgttcaatcaggcgacattgccgcgctggcgcaactgggattcacccgggtc
agcttgggcatccaggatttcgatccggacgtgcaggcggcgatcaatcgccgtcagggc
gagcaggagacattggaactcatcgctgcatgtcggcaagcaggtatcgcctcggtgaac
gtggatctggtgtacggtttgccgcggcagacgcaggcgggcttcgcgcgcacgctggac
cgcgtattggcggcgcgaccagaccggctggcgatctatgggtatgcacacctgccgcac
gtgttcaaggcgcagcagcagatcgatgtgcaggagttgccttccgcgcaggacaggctg
gcgctgctcgggcttgccgtacatacgttgtcggcggcgggctatcagtacatcggcatg
gatcacttcgcgcttcccagcgaagatctggcgatcgcgcaacggcgcggcgatctgcag
cgcaatttcatgggctacaccacgcatgccgataccgatctgatcggcttgggcgtgagt
gcgattagccatgttggcgacagctacagccagaatccacgcgaactggctgcgtgggaa
gcagcggtcgatcgcggtgccttgcccgtgtgccgcgggatgcaactgagtgcagacgac
ctgctgcgcgcggaggtcatccaggccttactgtgctgcggacgtgtggatctggctgcc
gtggcgcaacgccaccagtgcgatgcgcgccattgcttcgatgacgcgttggctgcgctg
gaggtacttgccgccgatggcctggtggaggtgcgcggcctgtgcgttgatgtcaccgca
acagggcggccgctggtccgcctggctgccatgtgcttcgaccgctatctgcaaccttcg
gagcaggccgtgcgctactccaaagcgatctga
DBGET
integrated database retrieval system
