Xanthomonas campestris pv. raphani: XCR_2399
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Entry
XCR_2399 CDS
T01872
Symbol
sdhC
Name
(GenBank) succinate dehydrogenase, cytochrome b556 subunit
KO
K00241
succinate dehydrogenase cytochrome b subunit
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00020
Citrate cycle (TCA cycle)
xcp00190
Oxidative phosphorylation
xcp00650
Butanoate metabolism
xcp00720
Other carbon fixation pathways
xcp01100
Metabolic pathways
xcp01110
Biosynthesis of secondary metabolites
xcp01120
Microbial metabolism in diverse environments
xcp01200
Carbon metabolism
Module
xcp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xcp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xcp_M00149
Succinate dehydrogenase, prokaryotes
xcp_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XCR_2399 (sdhC)
00650 Butanoate metabolism
XCR_2399 (sdhC)
09102 Energy metabolism
00190 Oxidative phosphorylation
XCR_2399 (sdhC)
00720 Other carbon fixation pathways
XCR_2399 (sdhC)
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Gene cluster
GFIT
Motif
Pfam:
Sdh_cyt
Fumarate_red_D
NADH_dh_m_C1
DUF6095
Motif
Other DBs
NCBI-ProteinID:
AEL07279
LinkDB
All DBs
Position
complement(2504612..2504947)
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AA seq
111 aa
AA seq
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MVTSILNRATGIVLSIGALVIAAALLTLMLGPDHWNCFRDMAAAWYGQVFLFGWTWCFAF
HLFGGLRHILQDFGQGYAVRSFVSIGWLSVILSFVLTAAIWAYVLLSGGAV
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atggtgacctcgatcctgaatcgagccaccggcattgttctgtccatcggcgccctggtg
attgccgccgccttgctgaccctcatgcttggccccgaccactggaattgcttccgcgac
atggcggcagcctggtatggacaggtgttcctgttcggctggacctggtgctttgccttc
cacctgtttggtggcctgcgccacatcctgcaggacttcggccagggctatgccgtgcgc
tcgttcgtcagcatcggctggttgtcggtgattttgagcttcgtgctgaccgccgccatc
tgggcgtacgtgctgctgtccggaggtgccgtatga
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