Xanthomonas campestris pv. raphani: XCR_2407
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Entry
XCR_2407 CDS
T01872
Symbol
edd
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00030
Pentose phosphate pathway
xcp01100
Metabolic pathways
xcp01120
Microbial metabolism in diverse environments
xcp01200
Carbon metabolism
Module
xcp_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
XCR_2407 (edd)
Enzymes [BR:
xcp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
XCR_2407 (edd)
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GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
AEL07287
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Position
2511112..2513028
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AA seq
638 aa
AA seq
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MSLHPNIQAVTDRIRKRSAPSRAAYLAVLDAALREGPFRSRLSCGNLAHGFAASEATDKS
RLRGAATPNLGIITAYNDMLSAHQPFEHYPQMIRDTARALGATAQVAGGVPAMCDGVTQG
RAGMELSLFSRDNIAQAAAIGLSHDMFDAVVYLGVCDKIVPGLLIGALAFGHLPALFMPA
GPMSPGIPNKQKAEVRERYAAGEATRAELLEAESASYHSPGTCTFYGTANSNQVLLEAMG
VQLPGASFVNPEQPLRDALTRQGTERALAISALGQDFRPFGRLIDERAIVNAVVALMATG
GSTNHTIHWIAVARAAGIVLTWDDMDLISQTVPLLTRVYPNGEADVNRFQAAGGTAFVFR
ELMDAGYMHDDLPTVVEGGMRAYANEPRLQDGKVIYVPGTATTADDSVARPVSDAFESQG
GLRLLRGNLGRSLIKLSAVKPQHRKIEAPAVVIDTPQVLNKLHAAGVLPHDFVVVLRYQG
PRANGMPELHSMAPLLGLLQNQGRRVALVTDGRLSGASGKFPAAIHMTPEAARGGPIGRV
REGDMVRLDGEAGTLEVLVSAEEWASREVAPNTAVAGNDLGRNLFAINRQVVGPADQGAI
SISCGPTHPDGALWSYDAEYELGADAAAAAAPHESKDA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcatccgaacatccaagctgtcaccgaccgtatccgcaagcgcagcgcgccc
tcgcgcgcggcgtacctggccgtcctcgatgccgccctgcgtgaaggcccgttccgtagc
cgcctgagttgcggcaatctcgcacacggttttgcggcctccgaggcgaccgacaagtcg
cgcctgcgcggcgcggccacgccgaacctgggcatcatcaccgcctacaacgacatgctc
tcggcgcatcagccgttcgagcattacccgcagatgatccgcgacaccgcgcgtgcgctc
ggcgccaccgcgcaggtcgccggcggcgtgccggcgatgtgcgacggcgtgacccagggc
cgcgccggcatggagctgtcgctgttttcgcgcgacaacatcgcccaggccgcggccatc
ggcctcagccacgacatgttcgatgcggtggtctatctgggcgtgtgcgacaagatcgtg
cctggcctgttgatcggcgcattggccttcggccacctgccggcgttgttcatgccggcc
ggcccgatgagcccgggcattcccaacaagcagaaggccgaagtgcgtgagcgctatgcc
gcgggcgaagccacccgtgccgagttgctggaagccgaatccgcctcctaccactcgccc
ggcacctgcaccttttacggcaccgccaactccaatcaggtgttgctggaagcgatgggc
gtgcaactgcccggcgcctcgttcgtcaatcccgagcagccgttgcgcgatgcactgacc
cgtcagggcaccgagcgtgcgctggcgatctccgcgctaggccaggacttccgcccgttc
ggccgtttgatcgacgaacgcgcgatcgtcaacgccgtggtcgccctgatggccaccggc
ggctccaccaaccacaccatccactggatcgccgtggcgcgtgcggcgggcatcgtgctg
acctgggacgacatggatctgatctcgcagaccgtgccgctgctgacccgcgtctacccg
aacggcgaagccgacgtgaaccgctttcaggctgctggcggcacggcattcgtgttccgc
gaactgatggacgccggctacatgcacgacgacctgcccaccgtggtcgaaggcggcatg
cgtgcctatgccaacgagccgcgtttgcaggacggcaaggtcatctatgtgcccggcacg
gcgaccaccgccgatgacagcgtggcacgcccggtcagcgatgcattcgaatcgcaaggt
ggcctgcgcctgctgcgcggcaacctgggccgctcgctgatcaagctgtcggcggtcaaa
ccccagcaccgcaagatcgaagcgcctgcggtggtgatcgacaccccgcaggtgctcaac
aagctgcatgcggccggtgtgttgccgcacgacttcgtggtggtgctgcgttaccagggc
ccgcgtgccaacggtatgccggagctgcattcgatggccccgctgctcggcctgctgcag
aaccagggccgtcgcgtggcgctggtcaccgacggccgtttgtccggtgcctccggcaag
ttccccgcagcgatccacatgacgccggaagcggcgcgtggcggcccgatcgggcgtgtc
cgcgaaggcgacatggtgcgcctggacggcgaagcgggcacgctggaagtgctggtttcg
gcagaagaatgggcatcgcgcgaggttgcacccaacaccgccgtggccggcaacgacctg
ggccgcaacctgtttgcgatcaaccgccaggtcgtcggcccggccgaccagggcgcgatt
tcgatttcgtgcggcccgacccatccggacggtgcgctgtggagctacgacgccgagtac
gaactgggcgccgatgcggccgctgccgccgcgccgcacgagtccaaggacgcctga
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