Xanthomonas campestris pv. raphani: XCR_2477
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Entry
XCR_2477 CDS
T01872
Name
(GenBank) transcriptional regulator LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xcp03000
]
XCR_2477
Transcription factors [BR:
xcp03000
]
Prokaryotic type
Helix-turn-helix
LacI family
XCR_2477
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
MarR_2
HTH_31
HTH_3
TetR_N
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AEL07352
LinkDB
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Position
complement(2593022..2594044)
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AA seq
340 aa
AA seq
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MAKGAVTIKDVAREARVSVATVSRALNGHDNVAGPVRQVVLDVAERLRYSPHAAARSLSS
RRTQTLGVVLPDLYGEFFSELIRGIDGAARAAGQHLLVSSYHGDPEAQGRALRSMRGRVD
GLLVLSPYAEQPGFLTDNLPQALPTVLINAHLPGADYPVLSIDDHAGAMAMTEHLLAAGH
RRIAFIGGPALNFDARERLRGFRDAIAGQAGGAEGLEFAGDFDEASGHRAGLAMLAAGDL
PDAVFAANDMTALGCLYAFAQADVSVPDDVALAGFDDIPLARFVHPALTTMRVSIARLGE
QAMTRLMRLVDQPGHDDGIRQLLTPELVVRASCGAGEPGA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggtgcggtcaccatcaaagatgtcgctcgagaagcacgcgtctccgttgcc
acggtatcgcgggcgctcaacgggcatgacaacgtcgccgggccggtgcgccaggtggtc
ctggacgtggccgaacggctgcgctacagcccgcatgcggcggcacgcagcctcagcagc
cggcgcacccagaccctgggtgtggtgctgcccgatctgtacggcgagttcttttccgaa
ctgattcgcggcatcgatggggcggcgcgtgcggccgggcagcatttgctggtttccagc
taccacggcgatcccgaagcccagggcagggcgctgcgttccatgcgcggccgcgtggat
ggcctgctggtgttgtccccgtatgcggagcagccgggttttctcaccgacaacctgccg
caggcactgcccaccgtcctgatcaacgcgcatctgccgggcgccgactacccggtgctg
agcatcgacgaccacgccggcgcaatggcgatgaccgagcacctgctcgcggccgggcac
cgccgcatcgccttcatcggcgggccggcgctgaacttcgatgcgcgcgagcgcttgcgc
ggcttccgtgacgcgatcgccggccaggcaggcggagcggaggggcttgaattcgccggc
gacttcgacgaagcctccggccatcgtgccggccttgccatgctggccgccggggatctg
cccgatgcggtcttcgctgccaatgacatgaccgcgctcggttgcctgtacgcctttgcc
caggcggatgtgtcggtgcccgacgacgtggcgctggccgggttcgacgacatcccgctg
gcgcgcttcgtgcacccggcgctgaccacgatgcgggtcagcattgcgcgccttggcgag
caggcgatgacacggctgatgcggctggtggaccagcccggccacgacgacggcatccgc
cagttgctcaccccggagctggtggtgcgtgcgtcctgcggtgccggcgagcccggcgcc
tga
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