Xanthomonas campestris pv. raphani: XCR_2785
Help
Entry
XCR_2785 CDS
T01872
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xcp02000
]
XCR_2785
Transporters [BR:
xcp02000
]
Other transporters
Pores ion channels [TC:
1
]
XCR_2785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Carmo_coat_C
Motif
Other DBs
NCBI-ProteinID:
AEL07655
LinkDB
All DBs
Position
2938080..2940806
Genome browser
AA seq
908 aa
AA seq
DB search
MAVAMAPTLAAAQTAAPSDAPASTEQNAGAVTELDKVQVTGLRRAIEGAISVKRDSTSIV
EAISAEDIGRLPDVSIAESLARLPGLAAQRVAGRAQVISVRGLSPDFSTTLLNGREVVST
GDNRSVEFDQYPSELVSGVTVYKTPDAGLVGQGLSGTVDMQTARPLSYNERVIAIGGRYQ
RNSLGKAANVDPYGNRFNVSYIDQFADRTIGLTIGYAHTDMPIQENQVGLYEPWQQVNAQ
RQRPGVADGVYFSDGIKALRRTGNQKRDGVMATLQYRPSNAWTSTLDAFHTEAEQIDTAN
QFELNLSNYNGGYTPGLNITDVRVNDRNTFLGGNASGVYPLVRGMYNKREDKIDAFGWNN
EITAGAVKIVADLNYSKATRDELNLENNLQLAPMPQLDTVGVAVNGNGFSQLSPGLNYSN
PDALFLTNTIYGSGYGKVPRVEDVLKGARLQASFPMPEALSWFSDLDVGVNYAHREKQKT
QPEGNITLGAQGEATVAADLQYAPVNLGFAGIGALPAWNVPATVSRYMLFNPSDDASFLV
SKAWTVEEKITTAWLRANLDTEWGVVGVRGNIGVQLQSADQSSQANYWDASQPVGSEVRP
IDDGKTYRDWLPSLNLAFQFPYEQTLRFALAKQVARPRVDQLRASLEFGVDTSTGRPGAS
GGNPMLDPWRANALDISYEKYFADRAYVAAAFFYKDLKSYIYTQSRDNYDFSALVAGYVP
PPGSAPVLTTGTFSAPFNGKGGTLRGLELTASLPLDLVFAPLEGFGIQASATFNDSDVQI
RDPESASSVGDGAISLPGLSKRVYNLTAYYEHKGFEARVSQRRRSDFIGEIGNFNGNRTL
RYVVGENITDAQISYNFADTSSLAGLTLLLQASNLSNSPYRTYAETKDRPLEYIEWGRTF
VLGVNYKF
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgccatggcaccgacgttggccgccgcacaaaccgcagccccgtcagacgca
cccgccagcaccgagcagaacgccggtgcagtgaccgaattggacaaggtgcaggtcacc
ggcctgcgccgcgcgatcgaaggcgccatttcggtcaagcgtgattccacctcgatcgtg
gaagccatctcggccgaagacatcggccgcctgcccgatgtgagcattgccgaatcgctg
gcgcgcctgcctggcctggccgcgcagcgcgtcgccggccgcgcacaggtgatcagtgtc
cgtggcctgtcgccggatttttcgaccaccctgctcaacggccgggaagtggtcagcacc
ggcgacaaccgcagcgtggagttcgaccaatacccgtccgaactggtcagcggcgtcacc
gtgtacaagacgcctgacgccggcttggttggccagggcctgtcgggtaccgtggacatg
cagaccgcccgcccgctcagctacaacgagcgcgtgatcgccatcggtggccgctaccag
cgcaattcgctgggcaaggccgccaacgtggacccgtacggcaaccgcttcaacgtcagc
tacatcgaccagttcgccgaccgcaccatcggcctgaccatcggctacgcgcatacggac
atgccgatccaggaaaaccaggtcggcctgtacgaaccctggcagcaggtcaatgcccag
cggcagcgcccgggcgtcgcagacggcgtgtatttctccgacggcatcaaggcgttgcgc
cgcaccggcaaccagaagcgcgatggcgtgatggccaccctccagtaccgcccgtccaac
gcctggaccagcaccctggatgccttccacaccgaagccgagcagatcgatactgccaac
cagttcgagctcaacctcagcaactacaacggcggttacacgccgggcctgaacatcacc
gacgtgcgcgtcaacgaccgcaacacgtttctcggcggcaacgccagcggcgtgtacccg
ctagtgcgcggcatgtacaacaagcgcgaagacaagatcgacgcattcggctggaacaac
gagatcaccgcaggcgcggtcaagatcgttgccgatctcaactactccaaggccacgcgc
gacgaactgaatctggagaacaatctccagctcgcgccgatgccgcagctggacaccgtt
ggcgtggcggtgaacggcaacggcttctcgcaactcagcccgggcctgaattattccaac
cccgatgcgctgttcctcaccaacaccatctatggctccggctacggcaaggtgccacgg
gtggaagacgtgctcaagggcgcgcgcctgcaggccagcttcccgatgcctgaagcactg
agctggttctccgatctggacgtgggcgtgaactacgcgcaccgcgaaaagcagaagacc
cagcccgaaggcaacatcacgctcggcgcgcaaggcgaagccaccgtggccgccgacctg
cagtacgccccggtcaatctgggtttcgccggcatcggcgccctgcccgcttggaacgtg
ccggccacggtctcgcgctacatgctgttcaaccccagcgatgacgcatcgttcctggtc
tccaaggcctggacggtcgaagaaaagatcaccaccgcctggctgcgcgccaacctggat
accgagtggggcgtggtcggcgtgcgcggcaatatcggtgtgcagctgcagagcgccgat
caatcctcgcaggccaattactgggatgcctcgcagccggtcggcagcgaagtgcggccc
atcgacgacggcaagacctaccgcgactggctgcccagcttgaacctggcgttccagttc
ccgtacgagcagaccttgcgcttcgcgttggccaagcaggtcgcccgcccgcgcgtggac
caactgcgtgcgtcgctggaattcggtgtcgacacctccaccggccggcccggtgccagc
ggcggcaacccgatgctcgacccgtggcgcgccaacgcgctggacatctcctacgagaag
tacttcgccgaccgcgcctatgtagcggccgccttcttctacaaggacctcaagagctac
atctacacccagagccgcgacaactacgacttctccgcactggtggccggctacgtgccg
ccgccgggctctgcaccggtactgaccaccggcaccttcagcgccccgttcaacggcaag
ggcggcaccctgcgcggcctggagctcaccgcctcgctgccgctggatctggtgttcgcc
ccgctggaaggcttcggcatccaggccagcgccaccttcaacgacagcgacgtgcagatc
cgcgacccggaaagcgcctccagcgtgggggatggcgccatcagcctgcccggcctctcc
aagcgcgtgtacaacctcaccgcctattacgagcacaagggcttcgaggcgcgcgtgagc
caacgccggcgttcggacttcatcggcgagatcggcaacttcaacggcaaccgcacactg
cgctacgtggtcggcgagaacatcaccgacgcgcagatcagctacaactttgccgacacc
agcagcctggccggcctgaccctgctactgcaggccagcaacctcagcaactcgccgtac
cgcacctacgccgaaaccaaggaccgcccgctggaatatatcgaatggggccgcaccttc
gtgctgggtgtgaactacaagttctga
DBGET
integrated database retrieval system
