Xanthomonas campestris pv. raphani: XCR_2892
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Entry
XCR_2892 CDS
T01872
Name
(GenBank) lytic mureine transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xcp01011
]
XCR_2892
Enzymes [BR:
xcp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
XCR_2892
Peptidoglycan biosynthesis and degradation proteins [BR:
xcp01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
XCR_2892
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
SLT_2
LysM3_LYK4_5
LysM_OapA
Motif
Other DBs
NCBI-ProteinID:
AEL07758
LinkDB
All DBs
Position
complement(3051704..3053248)
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AA seq
514 aa
AA seq
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MLAVLALLSLAPTAHALSKRDTEKVAALDARMAAAEKRYRDALVLVNNSDPKGTAEGDAA
LEDMEDVIDACIKQRGCLVANQLSTYKRLLKARADAEAPASDEPEDDDILLQADPDHIGP
LAADVPAAARTASLLNDQQHDFDKMVQYNPAVQAGIRRWLTDMRPSLLTSYENYANLRAV
MWPEWQKRALPEALLFGIMAKESNGKVHASSRAGAAGLMQFMPATGRRFGLGPDGTGFDT
RFDARSAAEASAAYLNERMVGLNRSIELALAAYNGGEGRAARVFAQSGGRGFWEQDVYNQ
FPAETKDYVPMVIAAAWIFLHPRQYGVDFPKLNAQSATIKLAKSTTIYELTICLGSMGTR
DGYMRALRNLNPRYEPDGWIPAGTTINATNRIASLYTRYCVSGPRADLARALITADLNSA
IVRTSAPEYVPSVAVGDVSPMAGVPTTVATGQPAVAKPKAKQVRSYTVAKGDTLGRVAQK
YQCEIKELAKANGLKAPSYALKPGQSIKLAGCDR
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgttggccgtgctggcgttgttgtccctcgctcctactgcccatgccttgtccaagcgc
gataccgaaaaggtcgctgcgctggatgcacgcatggccgccgccgagaagcgctaccgc
gacgcattggtgctggtgaacaactccgaccccaagggcaccgccgaaggcgacgccgca
ctggaggacatggaagacgtcatcgacgcctgcatcaagcagcgtggctgcctggtggcc
aaccagctgtcgacctacaagcgcctgctcaaggcgcgcgcggatgcggaagcgccggcg
tccgacgagccggaagacgatgacatcctgctgcaggccgacccggaccacatcggcccg
ctggcggccgacgtccccgctgcggcccgcacggccagtctgctcaacgaccagcagcat
gacttcgacaagatggtgcagtacaacccggcggtgcaggccggcatccgccgctggctg
accgacatgcgtccatcgctgctgaccagctatgagaattacgccaacctgcgggcggtg
atgtggccggaatggcagaaacgcgcactgccggaggcgctgctgttcggcatcatggcc
aaggaatccaacggcaaggtgcacgccagttcgcgtgccggcgccgcagggctgatgcag
ttcatgccggccaccgggcgccgcttcggactgggcccggacggtaccggtttcgatacg
cgctttgatgcgcgcagtgccgccgaggccagcgccgcctatctcaacgagcgcatggtg
gggctcaaccgcagcatcgaactggcgcttgcggcctacaacggtggcgaagggcgcgcg
gcgcgcgtcttcgctcagtctggcggccgcgggttctgggagcaggacgtctacaaccag
ttcccggctgaaaccaaggactatgtgccgatggtgattgccgcggcctggatcttcctg
cacccacgccagtacggtgtggactttcccaagctcaatgcacagtcggccaccatcaag
ttggccaagtcgaccaccatttacgaactcaccatctgcctgggcagcatgggcacgcgc
gacggctatatgcgcgcgctgcgcaatctcaacccgcgctacgaacccgatggctggatc
ccggccgggaccaccatcaacgccaccaatcgcatcgccagcctgtacacgcgctactgc
gtgagcggcccgcgtgccgacctggcccgcgccttgatcaccgccgacctcaatagcgcg
atcgtgcgcaccagcgcgccggagtacgtgcccagcgtggcggtgggcgatgtgagcccg
atggcaggcgtgccgaccacggtggccaccggccagccggcggtcgccaagcccaaggcc
aagcaggtgcgcagctacaccgttgccaagggcgacaccctgggccgggtcgcacagaag
taccagtgcgagatcaaggagctggccaaggccaacggcctgaaggcgccgtcgtacgcg
ctcaagccggggcaatcgatcaagctggctggttgcgatcgctga
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