Xanthomonas campestris pv. raphani: XCR_3106
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Entry
XCR_3106 CDS
T01872
Name
(GenBank) bifunctional diaminopimelate decarboxylase-asparta
KO
K12526
bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:
4.1.1.20
2.7.2.4
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00260
Glycine, serine and threonine metabolism
xcp00261
Monobactam biosynthesis
xcp00270
Cysteine and methionine metabolism
xcp00300
Lysine biosynthesis
xcp00470
D-Amino acid metabolism
xcp01100
Metabolic pathways
xcp01110
Biosynthesis of secondary metabolites
xcp01120
Microbial metabolism in diverse environments
xcp01230
Biosynthesis of amino acids
Module
xcp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
xcp_M00018
Threonine biosynthesis, aspartate => homoserine => threonine
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XCR_3106
00270 Cysteine and methionine metabolism
XCR_3106
00300 Lysine biosynthesis
XCR_3106
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XCR_3106
09110 Biosynthesis of other secondary metabolites
00261 Monobactam biosynthesis
XCR_3106
Enzymes [BR:
xcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.2 Phosphotransferases with a carboxy group as acceptor
2.7.2.4 aspartate kinase
XCR_3106
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
XCR_3106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
AA_kinase
Orn_DAP_Arg_deC
ACT_9
Ala_racemase_N
ACT
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AEL07970
LinkDB
All DBs
Position
complement(3279717..3282326)
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AA seq
869 aa
AA seq
DB search
MSASLSTDRWIVLKFGGTSVSRRHRWDTIGKLASKRANETGGRVLVVVSALSGVTNELTA
IADGAADSAQRVAALELRHREFLAELELDADAVLGARLAALHALVGDARAASRTLDWQAE
VLGQGELLSSTIGAAYLHANGLDMGWLDAREWLSALPPQPNQSEWSKRLSVSCQWQSDSA
WRARFDAQPTRLLITQGFISRHADGGTAILGRGGSDTSAAYFGALLGASRVEIWTDVPGM
FSANPKEVPDARLLTRLDYYEAQEIATTGAKVLHPRSIKPCRDSGVPMAILDTERPDLPG
TSIDGSAEPVLGVKAISRRNGIVLVSMEGIGMWQQVGFLADVFTLFKKHGLSVDLIGSAE
TNVTVSLDPSENLVNTDVLAALSADLSQICKVKIIVPCAAITLVGRGMRSLLHKLSDVWA
TFGQERVHMISQSSNDLNLTFVIDESDADGLLPILHAELIDSGAMPVSEGEVFGPRWRDI
IGSVRPRPTPWWHAERAHLLTLSKAGTPRYVYHLPTVRARAQALAQIAAVDQRYYAIKAN
SHPAILMALEQAGFGLECVSHGELRRVFDTLPELSPRRVLFTPSFAPRSEYEAAFALGVT
VTVDNVEVLKRWPELFRGRNVWLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVELA
RTLEVTITGVHAHLGSGVETGEHWRMMYDELAGFARRIGTVETIDIGGGLPIPYSAEDEP
FDLELWAKGLAEVKAVHPGFRLAIEPGRYLVAEAGVLLAQATQVIEKDGIHRVGLDAGMN
SLIRPALYDAWHDIENLSQLGAPADGSFDVVGPICESSDVFGKRRRLPAATAPGDVMLIA
DAGAYGYSMASTYNQRELPREEVIDAATG
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcttccctttctaccgatcgttggatcgtcctcaagttcggcggcacctcggtg
tcgcgtcgtcatcgctgggacacgattggaaaactggcgagcaaacgggcgaacgagacc
ggcggccgcgtgctggtggtggtgtctgcgctgtcgggcgtcaccaacgagctcactgcc
atcgccgatggtgctgccgacagcgcgcagcgcgtggcggcactggaactgcggcatcgc
gaattccttgccgagctcgagctcgatgccgacgcagtgctgggtgcgcggcttgccgcg
ttgcacgcgttggtgggcgatgcacgcgctgccagccgcacgctcgactggcaggccgag
gtgctggggcagggcgaattgctgtcttccacgatcggtgcggcctatctgcatgccaat
ggcctggacatgggttggctggatgcgcgggagtggttgtcggcgttgccgccgcagccc
aaccagagcgagtggtccaagcgcttgtcggtgtcgtgccagtggcaatccgattctgca
tggcgggcgcgtttcgatgcgcagcccacgcggctactgatcacgcagggctttatttcg
cggcacgccgatggcggcactgcgatcctgggccgtggcggctcggacacctcggcggcg
tatttcggtgcattgctcggcgccagccgggtggaaatctggaccgacgtgcccggcatg
ttcagcgccaacccgaaggaagtgccggacgcgcgtctgctgacccgcctggactattac
gaggcgcaggagatcgccaccaccggcgccaaggtgctgcacccgcgctcgatcaagccc
tgccgcgattccggcgtgccgatggcgatcctggataccgaacgcccggatctgccgggc
accagcatcgatggcagcgccgaaccagtactcggcgtcaaggcgatcagccgccgcaac
ggcatcgtgctggtgtcgatggaaggcatcggcatgtggcagcaggtcggcttcctggcc
gatgtgttcacgctgttcaagaagcatggcttgtcggtggatctgatcggctcggccgaa
accaacgtcaccgtgtcgcttgatccgtccgaaaacctggtcaacaccgatgtgctggcg
gcgttgtcggcagacctgtcgcagatctgcaaggtcaagatcatcgtgccgtgcgcggcg
atcacgctggtcgggcgcggcatgcgctcgctgctgcacaagctctccgacgtgtgggcc
acgttcggtcaggagcgcgtgcacatgatttcgcagtcgtccaacgacttgaacctgacc
ttcgtcatcgacgaatccgatgccgacggcctgttgccgattttgcatgcggaattgatc
gatagcggcgccatgccggtcagcgaaggcgaggtgtttggcccacgctggcgtgacatc
atcggttcggtgcgcccgcggcccacgccgtggtggcatgccgagcgcgcgcatctgctg
acgctgtccaaggccggcacgccgcgttacgtgtatcacctgcccacggtgcgcgcgcgc
gcgcaagcgctggcgcaaattgccgcagtggatcagcgctattacgcgatcaaggccaac
tcgcatccggccatcctgatggcgctggaacaggctggattcggcctggaatgcgtctcg
cacggcgaattgcgccgcgtgttcgacacgttgcctgagctgtcgccacgccgcgtgttg
ttcacgccgagtttcgcgccgcgtagcgaatacgaggccgcgtttgcgctgggcgtgacc
gtcaccgtggacaacgtcgaagtgctcaagcgctggccggagttgttccgcggccgcaac
gtgtggctgcgcatcgacctgggccacggcgatggccaccacgagaaggtcaacaccggc
ggcaaggcgtccaagttcgggctgtcgtccacgcgcgtggatgagttcgtcgaattggcg
cgcacgctggaagtcaccatcaccggcgtgcatgcgcatctgggcagcggcgtggagacc
ggcgaacactggcggatgatgtacgacgaactggccggcttcgcgcgccgcatcggcacc
gtggagaccatcgacatcggcggtgggctgccgattccctacagcgccgaagacgagccg
ttcgacctggagctgtgggccaaggggctggccgaggtcaaggccgtgcatccgggcttc
cgtctggcgatcgagcctggccgttacctggtggccgaggccggcgtgttgttggcccag
gcgacccaggtgatcgaaaaggacggcatccatcgcgtcggcctggatgccggcatgaac
agcctgatccgcccggcgctgtacgacgcctggcacgacatcgaaaacctcagccagctc
ggtgcgcctgccgatggcagcttcgatgtggtggggccgatctgcgaatcctccgatgtg
ttcggcaagcgtcgccgcctgcctgcggccaccgcaccgggcgatgtgatgctgatcgcc
gatgccggcgcgtatgggtattccatggccagcacctacaaccagcgggagttgccgcgc
gaagaggtgatcgatgcggccactggctga
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