Xanthomonas campestris pv. raphani: XCR_3206
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Entry
XCR_3206 CDS
T01872
Symbol
soxR
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xcp03000
]
XCR_3206 (soxR)
Transcription factors [BR:
xcp03000
]
Prokaryotic type
Helix-turn-helix
MerR family
XCR_3206 (soxR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR
MerR_1
HTH_3
HTH_17
DUF6447
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AEL08070
LinkDB
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Position
complement(3373002..3373529)
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AA seq
175 aa
AA seq
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MKRQRGQGLHPAMAAQHPASTKVEVKAMQRELSVGDVAKRSGVAVSALHFYERKGLIRSL
RTAGNQRRYARDVLRRIAVIRVAQRLGVPLQQVLDAFSVLPDQRTPTRAEWARMSARWRG
QLDARIAELQALRDQLTDCIGCGCLSLRRCRLSNPGDTLAEGGDGAVRLSGTAGG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacggcagcgcgggcagggcttgcatcccgccatggccgcgcagcatcctgcctca
accaaggttgaggtcaaggcaatgcagcgtgagttgtccgtgggggatgtggccaagcgc
agtggcgtggcggtatcggcgttgcatttctacgagcgcaaggggttgatccgtagcctg
cgcactgccggcaatcagcgccgctatgcgcgtgatgtgctgcggcggatcgcggtgatc
cgcgtggcgcagcggctcggcgtcccgttgcagcaggtgttggatgcgttctcggtgctg
ccggatcaacgcacacccacgcgcgcggaatgggcgcgcatgtcggcacgttggcgtggc
cagctggacgcacgcattgccgagctgcaggcgctgcgcgaccagctcaccgactgcatc
ggctgcggctgcctgtcgctgcgccgctgccgcctgagcaatcccggcgacacactggcc
gagggtggcgacggcgcggtgcgcctgtcgggcactgccggcggctga
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