Xanthomonas campestris pv. raphani: XCR_3270
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Entry
XCR_3270 CDS
T01872
Name
(GenBank) alpha-L-fucosidase
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00511
Other glycan degradation
xcp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
XCR_3270
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
XCR_3270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xcp04147
]
XCR_3270
Enzymes [BR:
xcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
XCR_3270
Exosome [BR:
xcp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
XCR_3270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
Fucosidase_C
Motif
Other DBs
NCBI-ProteinID:
AEL08133
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All DBs
Position
3446986..3448605
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AA seq
539 aa
AA seq
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MLALGLLLALPAATLSAAQSPTAPTATTLSPEVIDQQWLDATAQYAPERARLVREAQAGA
RKGPFRPDWAALKAYQSPAWYDNAKFGIFIHWGVFSVPAFGSEWYSRNMYLEGSKEFAHH
VATYGPQASSGYKDLIPKFTAPKFDPTGWAKLFRESGARYVVPVAEHHDGFALYDSKLSD
WTAMKMGPKRDLLGELSTAIRAQGLHFGLSSHRAEHNWFFDGGRKFDSDVNDPRYAALYG
PAQVRLPGKDDADVANDWTPVSQAWLDDWLARTTELIDVYQPDLIYFDWWIAHPTFRSSL
PTMLAYYYNQGAARTEADRGVVVNYKLGAFPEGAGTLDIERGQLTGIHPTHWQTDTSVSN
ASWGYIENDTYKSPTFIIHMLADVVAKNGNLMLNIGPRADGSIPDTERGILLSIGKWLKT
NGGAIYDSKPWRVYGEGPTEVVGGTFQDVKTKPYTAEDFRFTTRDGALYAIELGWPADGK
AVIRSLTAADGVRGVTLLANGKKIPFEQQADGLHLRLPAKPVGESAYVFRIDLAPSSTP
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgctcggtctgttgctcgcgttgcctgccgccacgctcagcgctgcgcaatcg
cccaccgcaccgaccgccaccacgctcagcccggaggtcatcgaccagcagtggctcgac
gccaccgcgcagtacgcgcccgaacgcgcacggctggtgcgcgaagcgcaagccggcgcg
cgcaaggggccgttccgtcccgactgggccgcattgaaggcgtaccaatcacctgcgtgg
tacgacaacgccaagttcggcatcttcattcactggggcgtgttttcggtgccggccttc
ggcagcgagtggtactcgcgcaacatgtatctggaaggctccaaggaattcgcgcaccac
gtggcgacctatggcccgcaggccagcagcggctacaaggacctgattcccaagttcacc
gcacccaagttcgaccccactggctgggccaagctgttccgtgaatccggtgcgcgctac
gtggtgccggtggccgagcatcacgatggctttgcgttgtacgactcgaagttgtccgac
tggacggcgatgaagatggggcccaagcgcgacctgctgggcgagttgtccaccgcgatc
cgtgcgcaaggcctgcacttcgggctgtcctctcaccgcgccgagcacaactggttcttc
gatggcgggcgcaagttcgattcggacgtcaacgacccgcgctatgcggcgctgtacggc
cccgcgcaggtgcgcctgcccggcaaggacgacgccgatgtcgccaacgactggacgccg
gtgtcgcaggcgtggctggacgattggctggcgcgcaccaccgagttgatcgatgtctat
cagccggacctgatctatttcgattggtggatcgcccatcccaccttccgcagcagcctg
ccgaccatgctggcgtactactacaaccagggcgcggcgcggaccgaagccgaccgtggc
gtggtggtgaactacaagctgggtgcgttccccgaaggcgccggcacgctggatatcgag
cgcggccagctcaccggcatccaccccacgcattggcagaccgacacatcggtgagcaat
gcgtcgtggggctacatcgaaaacgacacctacaagtcgcccaccttcatcatccacatg
ctggccgatgtggtggccaagaacggcaacctgatgctcaacatcggcccgcgcgccgat
ggctccatccccgataccgagcgcggcatcctgctttcgatcggcaagtggctcaagacc
aatggcggcgcgatctacgacagcaagccgtggcgcgtgtatggcgaaggccccaccgaa
gtggtgggcggcaccttccaggacgtcaagaccaagccgtacacggctgaagatttccgc
ttcaccacccgcgatggcgcgctatatgccatcgaactgggctggccggccgatggcaag
gcggtgatccgctcgctcaccgccgccgatggcgtgcgcggggtgacgctgctggccaat
ggcaaaaagattcctttcgaacaacaggccgatggcttgcacctgcggctgccggccaag
ccggtcggcgaaagcgcctacgtgttccgcatcgaccttgcgccctcttccactccctga
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