Xanthomonas campestris pv. raphani: XCR_3273
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Entry
XCR_3273 CDS
T01872
Name
(GenBank) beta-mannosidase
KO
K01192
beta-mannosidase [EC:
3.2.1.25
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00511
Other glycan degradation
xcp04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
XCR_3273
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
XCR_3273
Enzymes [BR:
xcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.25 beta-mannosidase
XCR_3273
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_2_N2
Ig_mannosidase
Mannosidase_ig
Glyco_hydro_2
Glyco_hydro_2_C
Glyco_hydro_2_N
Ig_GlcNase
Big_3_2
Motif
Other DBs
NCBI-ProteinID:
AEL08136
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All DBs
Position
3452309..3454990
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AA seq
893 aa
AA seq
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MSLSRHRRVPAPARLGLALAFAMSQAWAAPPTAVTLDSGWQVRLVPGQEQAKTYPKAAAW
LPAQVPGVVQTDLIAAKVVPDPFYRDNEGKIQWAGLSDWQYQTRFKVDAATLAREHVELV
FDGLDTFAEVTLNGKPLLSADNMFRQWRVDAKALLKRGDNVLEVKLFSPIKKIQPWLAKQ
PYALPGAYDSAFGDEPESRQSSTYVRKAPYNFGWDWGPRMVNAGIWKDVRVEAWDAVRVD
GLHIAQQRVDAESAQLQAQLELQAGRSGPVQVTLDMLGPDGQKVGQFTQQAVVDPGQNRI
DLAVRIAKPKRWFPAGYGAQDRYTFVATVRDADGDSQQIKRITGLRSVELRREKDKFGKS
MEIVINGIPIFAKGANLIPLDAFPSRVSQARMRSTLQDARDANMNMLRMWGGGHYQDDHF
YEVADELGIMIWQDFMFGGAVPPYDVEFRENTRQEAIEQVKRLRDHPSVVLWCGNNEVQT
GWENWGDRVKFKQSVDPEERSRIERGMTTLFGTVFREVVATYDSDVPYWSTSPGTNFDGA
ADQANDGDMHYWKVWGGPALPVTEYLNVTPRFMSEYGLQSFPDMRTVRAFAEPGDMDPES
PVMRVHQKFDKGNGNKRLMLYIRREFGEPKDFESFVYLSQLMQAEGINLAASHLRASRPQ
SMGSLYWQLNDVWPGASWSSVDYYGRWKALHYHARRFYAPEMIAALRNDKGQTEVSLVSD
RTTPLQARWRMRVMSMEGKVLSKREEKATLKPLSSLQVGNFSDKQLLGSADPKRSYAVFE
LLDGDTVLSREVVFFAAAKQLALPTATIDSQWRADGDGYALTLSSKTLAREVWLSFGDVD
AALSDNAFDLLPGEPLTVHVTSKTALAQLQSALQVRDLASTLAGAPPEPAESK
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtcccgccaccgtcgtgttcctgcacccgcccgcctcgggcttgccctcgcc
ttcgccatgtcgcaggcctgggcggcgccgcccacggccgtgacgctggacagcggctgg
caggtgcggctggtgccggggcaggaacaggccaagacctaccccaaggccgccgcctgg
ttgccggcgcaggtgccgggcgtggtgcagaccgatctgatcgccgccaaggtcgtgccg
gacccgttttaccgcgacaacgaaggcaagattcagtgggccggcctgagcgactggcag
taccagacgcgcttcaaggtcgatgcggccacgctcgcgcgcgagcatgtggagctggtg
ttcgatggcctggatacgtttgccgaggtcaccctcaacggcaagccgttgctcagtgcc
gacaacatgttccggcagtggcgcgtggacgccaaggcgctgctcaagcgcggcgacaac
gtgctggaagtgaagctgttttcgccgatcaagaagatccagccgtggctggccaagcag
ccctacgccctgccgggcgcctacgattcggccttcggcgacgagcccgaatcgcggcaa
agctccacctacgtgcgtaaggcgccgtacaacttcggctgggactggggcccgcgcatg
gtcaacgccggcatctggaaagacgtgcgtgtggaagcctgggatgcggtgcgcgtggat
gggctgcatatcgcccagcaacgtgtggatgccgagagtgcgcaactgcaggcgcagctc
gaattgcaggccggccgcagcgggccggtgcaggtgacgctggatatgctcggcccggat
gggcagaaagttgggcagttcacccagcaggcggtggtcgatcccggccagaaccgcatc
gatctggccgtgcgcatcgccaagcccaagcgctggttcccggccggctacggcgcgcag
gaccgctacaccttcgtggccacggtgcgcgatgccgatggcgacagccagcagatcaag
cgcatcaccggcctgcgttcggtggagctgcgccgcgaaaaagacaagttcggcaagagc
atggagatcgtgatcaacggcatcccgatctttgccaagggcgccaacctgattccgctg
gatgccttcccctcgcgcgtcagccaggcgcgcatgcgcagcaccctgcaggacgcgcgc
gatgccaacatgaacatgctgcgcatgtggggcggcgggcattaccaggacgaccatttc
tacgaggtggccgacgagctgggcatcatgatctggcaggacttcatgttcggtggcgcg
gtgccgccgtatgacgtggagttccgcgagaacacccggcaggaggcgatcgagcaggtt
aaacgcctgcgcgaccatcccagcgtggtgttgtggtgcggcaacaacgaagtgcaaacc
ggttgggaaaactggggcgaccgggtcaagttcaagcagtcggtggacccggaagaacgc
agccgcatcgagcgtggcatgaccacgctgttcggcaccgtgttccgcgaagtggtcgcc
acctacgatagcgacgtgccgtactggtccacctcgcccggcaccaacttcgacggcgcc
gccgaccaggccaacgatggcgacatgcattactggaaggtctggggcggcccggcgctg
ccggtcaccgaatacctcaatgtcactccgcgtttcatgtccgaatacggcctgcagtcg
ttccccgacatgcgcactgtgcgcgcgttcgctgaacccggcgacatggatccggaatcg
ccggtgatgcgcgtgcatcagaagttcgacaagggcaacggcaacaagcggctgatgctg
tatatccgccgcgaatttggcgagcccaaggatttcgaaagcttcgtctacctgagccag
ctgatgcaggccgaaggcatcaacctggccgcctcgcatctgcgcgcctcacgcccgcag
tcgatgggctcgctgtactggcagctcaacgacgtgtggcccggcgcctcctggtcgagc
gtggactactacggccgctggaaggcgctgcactaccacgcacgccgcttctatgcgccg
gagatgatcgccgcgctgcgcaacgacaagggccagaccgaggtctcgctggtgtccgac
cgcaccacgccgctgcaggcgcgctggcgcatgcgcgtgatgagcatggagggcaaggtg
ctgagcaagcgcgaagaaaaagccacgctcaaaccgctgagcagcctgcaggtgggcaac
ttcagcgacaagcaattgctgggcagcgccgatccgaagcgtagctacgcggtgttcgaa
ctgctggatggcgataccgtgctttcacgcgaagtggtgtttttcgcggccgccaaacaa
ctggcattgcccaccgccacgatcgacagccagtggcgcgccgatggcgatggctacgcg
ctcacgctgtccagcaagacgctggcgcgcgaggtgtggctgtcgttcggcgacgtggac
gccgcgctgtcggacaacgccttcgatctgctgccgggcgagccgctgaccgtgcacgtg
accagcaagactgcgctggcgcagttgcagtccgcgctgcaggtccgcgacctggccagc
acgctggcgggtgcaccaccggagccggccgaaagcaaatga
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