Xanthomonas campestris pv. raphani: XCR_3372
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Entry
XCR_3372 CDS
T01872
Name
(GenBank) TonB-dependent outer membrane receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xcp02000
]
XCR_3372
Transporters [BR:
xcp02000
]
Other transporters
Pores ion channels [TC:
1
]
XCR_3372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DraIII
TrbC
Motif
Other DBs
NCBI-ProteinID:
AEL08234
LinkDB
All DBs
Position
3569125..3571506
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AA seq
793 aa
AA seq
DB search
MNTPLSTLATAIVAALLASPALAQNTPAATANTLDTVIVTGTRVSDRTVAESQSPIDIIS
AESLQATGTSELATALARALPSLNFPRPALSDGTSAIRPAQLRGLSPDQVLVLVNGKRRH
TSSLLNLNGTIGRGAAAVDLNTIPVAAIARVEVLRDGASAQYGSDAIAGVVNIVLKGAEK
GGSLQAGFGQYSAGDGSNYELSGDTGVAYGGDRGWLHVAAQLNQQDPTDRARAYAGAPSA
SQPAVGQKAFKIGDPDVNAQAVSANTEFNFSDSITGYAFATASNRDITAFAFYRAPGSTA
QNILSIYPQGFLPEIQTYAKDRSLVAGVRGSTASGWDWDASYNYGYNKIDFHTRNTLNVS
LGPTSPTSFYDGALETTQNIVNLDVKRGFDWGLAYPVTVAFGAEYRNEKWNQSPGEVGSY
FQSGTLAGGAQGFGGFAPSVSGQYSRDSYALYADIEADFTDKFSAGLAGRYEDYSDFGSQ
ASGKLSARYAFTDKVALRGTVSSGFRAPSLAQQYFQSTSTTFLAGNPNPFEIRTFPADST
VARALGAEPLDAETSLSYSLGLVLQPTDALYVTVDAYQIDVDDRIVLSSNLTGTGVRSLL
ESQGIFGINGGRYFTNAVDTRTRGVDVVGSYRWQLAASSIDLTAGYNYSETEVRSVAANP
AALSANGLSLERIDRTERGRIEEGFPRDKFLINGSWNLEHWTLALGATRYGEYTTRPAAA
INDQTFGAKWVVDASASYKIDRWTLTLGADNLLDEYPDENNFANSTSGQFPYSNLSPFGF
NGAYVYGRINYRW
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaataccccgctgtccacgcttgcgaccgccatcgtcgccgcgttgcttgcctccccc
gccctcgcccagaacaccccggcggccaccgccaacaccctggacacggtcatcgtcaca
ggtacccgcgtgtccgaccgcaccgtggccgagtcgcaatcgcccatcgacatcatcagc
gccgagtcgctgcaggccaccggcacctccgagctggccactgcgctggcgcgtgcgctg
ccctcgctgaacttcccgcgcccggcgctgagcgatggcaccagcgcgatccgccccgcc
cagctgcgcgggctctcgcccgaccaggtactggtgctggtcaatggcaagcgccgccac
acctcgtcgctgctcaacctcaacggcaccatcggccgcggcgccgcagcagtggacctg
aacaccatcccggtcgcggccatcgcgcgcgtggaagtgctgcgtgacggcgcgtcggcg
caatacggctccgacgccatcgccggcgtggtcaacatcgtgctcaagggcgcggaaaag
ggcggcagcctgcaggccggattcggccagtattcggccggcgacggcagcaactacgag
ttgtccggcgacaccggcgtggcctacggcggcgaccgcggctggctgcacgtggccgcc
cagctcaaccagcaggacccgaccgaccgcgcccgcgcctacgccggcgcacccagcgcc
tcgcagcccgccgttggccagaaggccttcaagatcggcgaccccgacgtcaacgcacag
gcggtgtcggccaacaccgaattcaacttcagcgacagcatcaccggctacgcattcgcc
accgcgagcaaccgcgacatcaccgcgttcgcgttctaccgcgcgccgggcagcaccgcg
cagaacatcctgtcgatctatccgcagggcttcctgccggaaatccagacctacgccaag
gaccgctcgctggtcgccggcgtgcgcggctccaccgccagcggctgggactgggatgcc
agctacaactacggctacaacaagatcgacttccacacccgcaacacgctcaacgtgagc
ctggggccgacctcgcccacgtcgttctatgacggcgcgctggaaaccacgcagaacatc
gtcaacctcgacgtcaagcgcgggttcgattggggcctggcgtatccggtgacggtggcg
ttcggcgccgaataccgcaacgagaagtggaaccagtcgccgggcgaagtgggctcctat
ttccagagcggcacgctggccggtggcgcgcagggcttcggtgggtttgcaccgagtgtg
tccgggcagtactcgcgcgacagctacgcgctgtatgccgacatcgaagccgacttcacc
gacaagttctccgccggcctggccgggcgctacgaggactacagcgatttcggcagccag
gcatcgggcaagttgtcggcgcgctatgcgttcaccgacaaggtcgccttgcgcggtacg
gtgtcgtcgggcttccgcgcaccgtcgctggcgcagcagtatttccagtccaccagcacc
accttcctggccggcaatccgaacccgttcgagatccgtaccttcccggccgacagcacg
gtggcacgcgcgctcggcgccgagccgctggatgcggagacctcactctcctacagcctg
ggcctggtattgcagccgaccgacgcgctgtacgtcaccgtggatgcgtaccagatcgat
gtggacgaccgcatcgtgctgtcgtccaacctcaccggtaccggcgtgcgttcgctgctg
gaatcgcaaggcatcttcggcatcaatggcggccgttacttcaccaatgcggtggacacg
cgcacccgcggtgtggacgtggtgggcagctaccgctggcagctcgccgccagcagcatc
gacctgaccgccggctacaactattcggaaaccgaagtgcgcagcgtggccgccaacccg
gccgcgttgtcggccaacgggttgagcctggagcgtatcgaccgcaccgaacgtggccgc
atcgaagaaggcttcccgcgcgacaagttcctgatcaacggcagctggaatctggagcac
tggacactggcgctgggtgccacgcgttacggcgaatacaccacgcgcccggccgcggcg
atcaacgatcagaccttcggcgccaagtgggtggtggatgcctcggccagctacaagatc
gaccgctggacgctcaccctgggcgcggacaacctgctggacgagtacccggacgagaac
aacttcgccaactccaccagcgggcaattcccttacagcaatctgtcgccgttcggtttc
aacggtgcctacgtgtacggccgcatcaactaccgctggtaa
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