Xanthomonas campestris pv. raphani: XCR_3572
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Entry
XCR_3572 CDS
T01872
Name
(GenBank) fimbrial assembly membrane protein
KO
K02662
type IV pilus assembly protein PilM
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
xcp02044
]
XCR_3572
02035 Bacterial motility proteins [BR:
xcp02035
]
XCR_3572
Secretion system [BR:
xcp02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
XCR_3572
Bacterial motility proteins [BR:
xcp02035
]
Pilus system
Pilus assembly proteins
XCR_3572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PilM_2
FtsA
MreB_Mbl
DDR
DUF4781
VLPT
Motif
Other DBs
NCBI-ProteinID:
AEL08433
LinkDB
All DBs
Position
complement(3804700..3805758)
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AA seq
352 aa
AA seq
DB search
MGLLPKSQSPLIGVDISSTAVKLLQLSRSGNRFRVEHYAVEPLPPNAVVEKNIVEVEAVG
EAIRRAINRSGSKAKNAAAAVAGSAVITKLIPMPADLDDSDLEAQVELEATNYIPYPIEE
VNLDFEVLGPMPNSPDMVQVLLAASRSENVELRQSALELGGLVAKVMDVEAFAVENAFAL
VASELPVAADAVVALVDIGATMTTLSVLRSGRSLYSREQVFGGKQLTDEVMRRYGMTYEE
AGLAKRQGGLPESYEVEVLEPFKEATVQQISRLLQFFYAGSEFNRVDCIVLAGGCAALSR
LPEMVEEQLGVTTVVANPLAQMTLGPKVQAHALALDAPALMIATGLALRSFD
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtggggcttttacccaagagtcagtcgccacttattggtgtcgacatcagttccactgcg
gtcaagctattgcagctgtcacgcagcggaaatcgttttcgcgtggaacattacgctgtg
gaaccgttgccgccgaatgcggtggtggaaaagaacatcgtcgaagtcgaagcggtgggc
gaagccattcgccgcgccatcaaccgttccggcagcaaggccaagaacgcggcagcggcc
gtggctggctcggcggtgatcaccaagctgatccccatgccggcggatctggacgatagc
gatctggaagcccaggtcgagctggaagccaccaactacatcccgtacccgatcgaggaa
gtgaatctcgatttcgaggtgctcggcccgatgcccaacagcccggacatggtccaggtg
ctgttggcggcgtcgcgttcggagaacgtcgagctgcgccaatcggcgttggagctcggt
gggctggtcgccaaggtgatggacgtggaggccttcgcggtcgagaacgcctttgccctg
gttgccagcgaattgccggtcgccgccgatgcggtggtggcgctggtggacatcggcgcg
accatgaccacgttgagcgtgctgcgctcagggcgcagcctctacagccgcgagcaggtg
ttcggtggcaagcagctcaccgacgaagtcatgcgccgctacggcatgacctatgaagaa
gctggcctggccaagcgtcagggcggcctgccggagagctacgaggtcgaagtgctggag
ccgttcaaggaagcgacggtgcagcagatcagccgcctgttgcagttcttctatgcgggc
agcgaattcaatcgcgtcgattgcatcgtgctggcaggcggctgcgccgcgttgtcgcgc
ctgccggagatggtggaagaacagctgggcgtgactaccgtggtcgccaacccgctggca
cagatgacgctgggcccgaaggttcaggcccatgcgctggcgctggatgcgcctgcattg
atgatcgccaccggcctggccctgaggagctttgactga
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