Xanthomonas campestris pv. raphani: XCR_3670
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Entry
XCR_3670 CDS
T01872
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00540
Lipopolysaccharide biosynthesis
xcp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
XCR_3670
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xcp01005
]
XCR_3670
Enzymes [BR:
xcp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
XCR_3670
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
XCR_3670
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
XCR_3670
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
XCR_3670
Lipopolysaccharide biosynthesis proteins [BR:
xcp01005
]
Lipid A
XCR_3670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glyco_trans_1_2
TetR_C_22
Glycos_transf_1
Motif
Other DBs
NCBI-ProteinID:
AEL08530
LinkDB
All DBs
Position
complement(3917164..3918582)
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AA seq
472 aa
AA seq
DB search
MSASRPGQAGQANQQAGRTATHARAQRLPYPARMRKDPIEWLLRGLYSALLYLLLPVTVY
HLVWRGFRVREYFNRWNERYASYTHACGRPRVWVHAVSVGEVNAAAPLVNALRAQRPDIR
WVITTITPTGSERVRALWGDAVDHVYLPYDVPGSVGRFLEHFRPRLALILETELWPNMLF
GCRDRQIPVYILNARLSARSLRGYRVLAPLISRALRTVTCVAAQSQDDAGRFITLGARPD
QVVALGNLKSDIAAPAQLQDLVAQFRMQVPATRPVWIAASTHEGEEAAVADIHAQLLKQF
PDLLLLWAPRHPERFPKVEALARDRGWTVTTRKAQQWPQARDQVFVVDTLGELMSFYACA
QVAFVGGSLQPIGGHNLLEPAAVGTPAVTGPHLHNFSEISRRMREADAVTICEDAACVQH
DLARLLGDPAQREAMAAAGLALVANGKGAVARTLVQIAPDLPSVVGEIASSQ
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgcgtccaggccgggccaggcaggccaggccaatcagcaagcaggcaggacggcc
acccatgcgcgcgcgcaacgcctcccgtatcctgcacgcatgcggaaagacccgatcgaa
tggctgttgcgcgggctgtactcggcgctgctctacctgttgctgccggtgacggtgtac
cacctggtgtggcgcggcttccgcgtgcgcgaatatttcaaccgatggaacgagcgctac
gcctcctacacgcatgcctgcgggcgcccgcgcgtgtgggtgcacgcggtgtcggtcggc
gaggtcaatgcggcggcgccactggtgaacgccttgcgtgcgcaacggccggacatccgc
tgggtcatcaccaccatcaccccgaccggctccgagcgcgtgcgcgcgctgtggggcgat
gcagtggatcacgtctatctgccctacgacgtacccggcagtgtcgggcgcttcctcgaa
catttccgcccgcggctggcgctgatcctggaaaccgagttgtggccgaacatgctgttc
ggctgccgcgaccgccagattccggtgtacatcctcaatgcaaggctgtcggcgcgctcg
ctgcgtggctaccgcgtgctggcaccgctgatcagccgcgccttgcgcaccgtgacctgc
gtggcagcacagtcgcaggacgatgccgggcgcttcatcaccctgggcgcgcggccggat
caagtggttgctttgggcaatctcaagtccgatatcgccgcaccggcgcagctacaggat
ttggtggcgcagttccgcatgcaggtgccggcaacccggccggtgtggattgcagccagc
acgcacgaaggcgaagaagcggcggtggccgacatccatgcgcagctgctgaaacagttc
ccggacctgttgctgctgtgggcgccccggcatccggagcgctttcccaaggtggaggcg
ctggcgcgtgaccgcggctggaccgtgaccacgcgcaaggcgcagcagtggccgcaggcc
cgcgaccaggtattcgtggtcgataccctgggcgagttgatgagtttctatgcctgcgcg
caggtcgcgtttgtcggcggcagcctgcagccgatcgggggccacaatctgctggagccg
gcggcggtcggcacaccggccgtcaccggcccgcacctgcacaatttctcggaaatttcg
cggcgcatgcgcgaggccgatgcagtgaccatttgcgaggacgccgcgtgcgtgcaacac
gatctggcccgcctgctcggcgaccccgcacagcgcgaggccatggccgcggccgggctg
gcgctggtggctaacggcaagggcgcggtggcacgcaccctggtacagattgcgccggat
ctgccatcagtggttggcgagatcgcttcgtcgcagtga
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